RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 AGAP14A8MT82 685 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 EMC8O43402 210 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PRAMEF12O95522 483 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 IST1P53990 364 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 IL10RBQ08334 325 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CD47Q08722 323 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 G3BP1Q13283 466 aaKnown RBP eCLIP0.69□□□□□ -2.3
CEP290-208ENST00000604024 PAN3Q58A45 887 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 C6orf136Q5SQH8 315 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 SAXO1Q8IYX7 474 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 SLC22A18ASQ8N1D0 253 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TPRX1Q8N7U7 411 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TEKT4Q8WW24 435 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 ROBO4Q8WZ75 1007 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CDHR1Q96JP9 859 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 KRTAP4-1Q9BYQ7 146 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 GPR88Q9GZN0 384 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 RPF1Q9H9Y2 349 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 NTN4Q9HB63 628 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 OLAHQ9NV23 265 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 HAUS2Q9NVX0 235 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 OTOGLQ3ZCN5 2332 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TDRD6O60522 2096 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 RGS12O14924 1447 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 NUP160Q12769 1436 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 NPATQ14207 1427 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 KIAA0556O60303 1618 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 SHROOM2Q13796 1616 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PARD3Q8TEW0 1356 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 BCORL1Q5H9F3 1711 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 URB2Q14146 1524 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 NACAE9PAV3 2078 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 TEX48A0A1B0GUV7 120 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 RTCAO00442 366 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 SIGLEC5O15389 551 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 ZNF861PO60384 105 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 ATP5BP06576 529 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 CPN1P15169 458 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 FOSL2P15408 326 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CD1EP15812 388 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 RPA1P27694 616 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CDX1P47902 265 aaPredicted RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 MFAP3P55082 362 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 STX17P56962 302 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CXCL6P80162 114 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 IL17AQ16552 155 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CFAP61Q8NHU2 1237 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 TSSK2Q96PF2 358 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 SLC2A11Q9BYW1 496 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 DNAJC4Q9NNZ3 241 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 MIEF1Q9NQG6 463 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 SATB2Q9UPW6 733 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CA5BQ9Y2D0 317 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 RAPGEF6Q8TEU7 1601 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 AKNAQ7Z591 1439 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 TTC37Q6PGP7 1564 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 JCADQ9P266 1359 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CDK13Q14004 1512 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 BRWD3Q6RI45 1802 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 ZCCHC6Q5VYS8 1495 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 RALGAPBQ86X10 1494 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 NEO1Q92859 1461 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 C2orf92A0A1B0GVN3 265 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 MCF2LO15068 1137 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 H2AFZP0C0S5 128 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 HMGB2P26583 209 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 NDST1P52848 882 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 RBBP4Q09028 425 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CHAF1BQ13112 559 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 ABRAXAS2Q15018 415 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 METTL11BQ5VVY1 283 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 SUSD4Q5VX71 490 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 OR4C11Q6IEV9 310 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 LRP11Q86VZ4 500 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 NAXDQ8IW45 347 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 XXYLT1Q8NBI6 393 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 RBM41Q96IZ5 413 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 TIGD1Q96MW7 591 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 PLEKHA3Q9HB20 300 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 NECAP2Q9NVZ3 263 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 HAO2Q9NYQ3 351 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 C9orf78Q9NZ63 289 aaPredicted RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 RAI14Q9P0K7 980 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 DBF4Q9UBU7 674 aaPredicted RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 MORF4L1Q9UBU8 362 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 PPIEQ9UNP9 301 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 COLEC10Q9Y6Z7 277 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CEP170Q5SW79 1584 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 ABCC2Q92887 1545 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 KDM5DQ9BY66 1539 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 KDM5BQ9UGL1 1544 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 CFAP65Q6ZU64 1925 aaKnown RBP0.68□□□□□ -2.3
CEP290-208ENST00000604024 MAP3K4Q9Y6R4 1608 aa0.68□□□□□ -2.3
CEP290-208ENST00000604024 DNMBPQ6XZF7 1577 aa0.67□□□□□ -2.3
CEP290-208ENST00000604024 BLMP54132 1417 aaPredicted RBP0.67□□□□□ -2.3
CEP290-208ENST00000604024 TRAPPC8Q9Y2L5 1435 aa0.67□□□□□ -2.3
CEP290-208ENST00000604024 ZNF324O75467 553 aaPredicted RBP0.67□□□□□ -2.3
CEP290-208ENST00000604024 HSPB1P04792 205 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms