RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TMEM11P17152 192 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 POLR2EP19388 210 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CAPN3P20807 821 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CSRP1P21291 193 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 BCKDHBP21953 392 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACADLP28330 430 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CCR1P32246 355 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 MATKP42679 507 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 GSCP56915 257 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 IRX4P78413 519 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CREB5Q02930 508 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF33AQ06730 810 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CRYMQ14894 314 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRT31Q15323 416 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SF3A2Q15428 464 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 DUOXA1Q1HG43 343 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 FUT11Q495W5 492 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACCSLQ4AC99 568 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 PTPN20Q4JDL3 420 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRTCAP3Q53RY4 240 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 BRMS1LQ5PSV4 323 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 STPG1Q5TH74 334 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 GDPD4Q6W3E5 623 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 C11orf57Q6ZUT1 292 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CHST9Q7L1S5 443 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 BNIPLQ7Z465 357 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 TAC4Q86UU9 113 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC47A2Q86VL8 602 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF677Q86XU0 584 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 DEFB106AQ8N104 65 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM35BQ8NCS4 154 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR13A1Q8NGR1 328 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR2T3Q8NH03 318 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC44A1Q8WWI5 657 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 PRCCQ92733 491 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ELMOD3Q96FG2 381 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SIPA1Q96FS4 1042 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 PRICKLE1Q96MT3 831 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ERGIC2Q96RQ1 377 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 NODALQ96S42 347 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 NPY6RQ99463 290 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 BPIFA3Q9BQP9 254 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 NUP58Q9BVL2 599 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 NUSAP1Q9BXS6 441 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 GANQ9H2C0 597 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 FKRPQ9H9S5 495 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 EPB41L5Q9HCM4 733 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZDHHC4Q9NPG8 344 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACP6Q9NPH0 428 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 TCF7L2Q9NQB0 619 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 EIF2B3Q9NR50 452 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SAMSN1Q9NSI8 373 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ABCF3Q9NUQ8 709 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ABCB8Q9NUT2 735 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANO10Q9NW15 660 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 WSB2Q9NYS7 404 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 BCCIPQ9P287 314 aaKnown RBP eCLIP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SUN2Q9UH99 717 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC12A6Q9UHW9 1150 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 GGA2Q9UJY4 613 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 PILRBQ9UKJ0 227 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SCML1Q9UN30 329 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 PLA2G4CQ9UP65 541 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 DLGAP4Q9Y2H0 992 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 USP24Q9UPU5 2620 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 MYLKQ15746 1914 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACACAQ13085 2346 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGLV3-10A0A075B6K4 115 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZCWPW2A0A1B0GU75 182 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 GOLGA6L7A0A1B0GV03 622 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 A0A1W2PP11 408 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 MED19A0JLT2 244 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 F5H5T6 163 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 F8VZ95 297 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SH3BP5O60239 455 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SYNCRIPO60506 623 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 LMX1BO60663 402 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TBL1XO60907 577 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PTP4A3O75365 173 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CLDN11O75508 207 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 GJB3O75712 270 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 MOCS3O95396 460 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CALCAP01258 141 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CRYAAP02489 173 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ATP1A1P05023 1023 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TPM2P07951 284 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM106CPP0CH98 169 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CEACAM1P13688 526 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 POLR2CP19387 275 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANXA7P20073 488 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CD70P32970 193 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CSKP41240 450 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PTGER3P43115 390 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 DHPSP49366 369 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TPMTP51580 245 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SGSHP51688 502 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARF3P61204 181 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RPS24P62847 133 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PITX1P78337 314 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms