RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SIX3O95343 332 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 MLYCDO95822 493 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 STSP08842 583 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 HIST1H1TP22492 207 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 CPN2P22792 545 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ATP5A1P25705 553 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 SERPINB9P50453 376 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 PHEXP78562 749 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ID2Q02363 134 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 GTF2H2Q13888 395 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 E2F2Q14209 437 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TERF2Q15554 542 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ELAVL1Q15717 326 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 GTF2H2CQ6P1K8 395 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TRMT10CQ7L0Y3 403 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 GOLGA7Q7Z5G4 137 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM132CQ8N3T6 1108 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM156Q8N614 296 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 PTGR2Q8N8N7 351 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 APCDD1LQ8NCL9 501 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 HUS1BQ8NHY5 278 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ATP6V1E2Q96A05 226 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 PHF21BQ96EK2 531 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 CENPKQ9BS16 269 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 SORBS1Q9BX66 1292 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 IPPKQ9H8X2 491 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 LIN28AQ9H9Z2 209 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 LYRM4Q9HD34 91 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ADGRE2Q9UHX3 823 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 TNPO3Q9Y5L0 923 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 ESPL1Q14674 2120 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 NPIPA5E9PKD4 350 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ZG16O60844 167 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ITGA10O75578 1167 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ABHD2P08910 425 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 GCAP28676 217 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 MAGEA12P43365 314 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 PIK3CGP48736 1102 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 HLCSP50747 726 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 SLAMF1Q13291 335 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 SLC29A2Q14542 456 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 TECRLQ5HYJ1 363 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 LIPJQ5W064 366 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 OR4C11Q6IEV9 310 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 CPSF7Q8N684 471 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 DAZLQ92904 295 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ISL2Q96A47 359 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 RGMAQ96B86 450 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 REPS1Q96D71 796 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 FRMD6Q96NE9 622 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 OR8D2Q9GZM6 311 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 EPB41L4BQ9H329 900 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 DMRT3Q9NQL9 472 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 KCMF1Q9P0J7 381 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 XPR1Q9UBH6 696 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF180Q9UJW8 692 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF223Q9UK11 482 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 PCDHGA11Q9Y5H2 935 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 CLDN16Q9Y5I7 305 aa11.84□□□□□ -0.51
NPLOC4-213ENST00000573519 SCN2AQ99250 2005 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 C17orf105B2RV13 164 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 CCL21O00585 134 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 KLK8O60259 260 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 NME2P1O60361 137 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 SMIM24O75264 130 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 WISP2O76076 250 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 ZFAND5O76080 213 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 SNRPAP09012 282 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 RBP1P09455 135 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 ZNF24P17028 368 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 NME2P22392 152 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 TRHRP34981 398 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 PIK3CBP42338 1070 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 SSR4P51571 173 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 CASP6P55212 293 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 PCDH1Q08174 1060 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 SERTAD2Q14140 314 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 PCBP2Q15366 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 ZRSR2Q15696 482 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 C16orf47Q6ZP98 133 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 OR4N5Q8IXE1 308 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 CYP4Z2PQ8N1L4 340 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 MTFMTQ96DP5 389 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 GPR137Q96N19 417 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 CDK15Q96Q40 435 aa11.83□□□□□ -0.52
NPLOC4-213ENST00000573519 NOL11Q9H8H0 719 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms