RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 COPS7BQ9H9Q2 264 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 SEMA4BQ9NPR2 832 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 HSPB2A8KAH6 182 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 RAF1P04049 648 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 ENO2P09104 434 aaPredicted RBP16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 CCL3P10147 92 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 GABRB3P28472 473 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 HNRNPH1P31943 449 aaKnown RBP16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 HSPB2Q16082 182 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 TTC27Q6P3X3 843 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 BIVMQ86UB2 503 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 GOLM1Q8NBJ4 401 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 MORN4Q8NDC4 146 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 WFDC11Q8NEX6 87 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 FAM222BQ8WU58 562 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 MS4A6EQ96DS6 147 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 CAPZA3Q96KX2 299 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 SGCZQ96LD1 299 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 CBLCQ9ULV8 474 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 EML6Q6ZMW3 1958 aa16.66■□□□□ 0.26
CHCHD3-203ENST00000448878 ANKDD1BA6NHY2 528 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 C17orf105B2RV13 164 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 SYT5O00445 386 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 DVL2O14641 736 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 HCN1O60741 890 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 WDR47O94967 919 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 CCDC175P0C221 793 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 C1GALT1C1LP0DN25 315 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 PGAM1P18669 254 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 TACR1P25103 407 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 KCNJ2P63252 427 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 RNF4P78317 190 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 RCN2Q14257 317 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 CRYMQ14894 314 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 LIX1Q8N485 282 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 OR14A16Q8NHC5 309 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 PTPMT1Q8WUK0 201 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 JSRP1Q96MG2 331 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 CSF3RQ99062 836 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 SPRR3Q9UBC9 169 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 VWA7Q9Y334 891 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 ATG4BQ9Y4P1 393 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 CLDN16Q9Y5I7 305 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 DNAJC13O75165 2243 aa16.65■□□□□ 0.26
CHCHD3-203ENST00000448878 ANKHD1Q8IWZ3 2542 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 LRIT2A6NDA9 550 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 CTNSO60931 367 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 CERS1P27544 350 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 TRPC1P48995 793 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 ASCL1P50553 236 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 LIM2P55344 173 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 FOXO1Q12778 655 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 ASPHQ12797 758 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SLBPQ14493 270 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 DEFB113Q30KQ7 82 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SLC22A10Q63ZE4 541 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 PAMR1Q6UXH9 720 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 KRT78Q8N1N4 520 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 TTLQ8NG68 377 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SLC2A12Q8TD20 617 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 MBD6Q96DN6 1003 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 C18orf12Q96KH6 178 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 REXO4Q9GZR2 422 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 RBSNQ9H1K0 784 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SLC17A6Q9P2U8 582 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 COPS7AQ9UBW8 275 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 VTI1BQ9UEU0 232 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 IKZF3Q9UKT9 509 aa16.64■□□□□ 0.25
CHCHD3-203ENST00000448878 SYNDIG1LA6NDD5 238 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 TUBAL3A6NHL2 446 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 ZNF354AO60765 605 aaPredicted RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 LDB3O75112 727 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 GNAZP19086 355 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 ENDOUP21128 410 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 GDF5P43026 501 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 MAGEA3P43357 314 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 MTTPP55157 894 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 ID2Q02363 134 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 EFTUD2Q15029 972 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 HYAL4Q2M3T9 481 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 PRAMEF20Q5VT98 475 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 FAM45BPQ6NSW5 357 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 SBSNQ6UWP8 590 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 CLEC9AQ6UXN8 241 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 CHSY3Q70JA7 882 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 FRA10AC1Q70Z53 315 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 ULK2Q8IYT8 1036 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 RELL2Q8NC24 303 aaPredicted RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 OR2L5Q8NG80 312 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 FAM45AQ8TCE6 357 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 RNASE6Q93091 150 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 SLC6A15Q9H2J7 730 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms