RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ENDOUP21128 410 aaKnown RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 UQCRC2P22695 453 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 TBPL1P62380 186 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 CYP4F2P78329 520 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 SLBPQ14493 270 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHF1-201ENST00000374512 TSTQ16762 297 aaKnown RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 REEP3Q6NUK4 255 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 DPPA4Q7L190 304 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 NRSN1Q8IZ57 195 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 TAGAPQ8N103 731 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 IL17RCQ8NAC3 791 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 CEP19Q96LK0 163 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 RNF167Q9H6Y7 350 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 SLC25A19Q9HC21 320 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 ITM2CQ9NQX7 267 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 POU2F3Q9UKI9 436 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 PIPSLA2A3N6 862 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 J3KTA2 159 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 ARHGAP33O14559 1287 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 CXCL14O95715 111 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 TIMP2P16035 220 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 SPNP16150 400 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 CSTF2P33240 577 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHF1-201ENST00000374512 DSTNP60981 165 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 MPEG1Q2M385 716 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 SOWAHCQ53LP3 525 aaPredicted RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 ZNF648Q5T619 568 aaPredicted RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 AGAP6Q5VW22 663 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 CIDECQ96AQ7 238 aaPredicted RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 AGAP4Q96P64 663 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 OR5M11Q96RB7 305 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 NMNAT1Q9HAN9 279 aaPredicted RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 SPHK2Q9NRA0 654 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 HCFC1R1Q9NWW0 138 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 DKK3Q9UBP4 350 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 WBP11Q9Y2W2 641 aaKnown RBP17.13■□□□□ 0.33
PHF1-201ENST00000374512 GRIP1Q9Y3R0 1128 aa17.13■□□□□ 0.33
PHF1-201ENST00000374512 GASTP01350 101 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 ACRP10323 421 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 CNR2P34972 360 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 TAS2R50P59544 299 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 ILKQ13418 452 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 NCF4Q15080 339 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 LRRC26Q2I0M4 334 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 IL17RDQ8NFM7 739 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 WDR36Q8NI36 951 aaKnown RBP17.12■□□□□ 0.33
PHF1-201ENST00000374512 PDXPQ96GD0 296 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 LRIG1Q96JA1 1093 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 NLNQ9BYT8 704 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 SPATA7Q9P0W8 599 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 RAB23Q9ULC3 237 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 TMCC3Q9ULS5 477 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 MGAT4BQ9UQ53 548 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 SLITRK5O94991 958 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 OSMP13725 252 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 POU2F1P14859 743 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.334e-7■■□□□ 12.6
PHF1-201ENST00000374512 NNMTP40261 264 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 CRISP3P54108 245 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 ZNF658BQ4V348 819 aaPredicted RBP17.12■□□□□ 0.33
PHF1-201ENST00000374512 ARSIQ5FYB1 569 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 TMEM220Q6QAJ8 160 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.12■□□□□ 0.33
PHF1-201ENST00000374512 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
PHF1-201ENST00000374512 ERLEC1Q96DZ1 483 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 PRDM8Q9NQV8 689 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 SEC14L4Q9UDX3 406 aa17.12■□□□□ 0.33
PHF1-201ENST00000374512 UGT2B17O75795 530 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
PHF1-201ENST00000374512 XPAP23025 273 aaPredicted RBP17.11■□□□□ 0.33
PHF1-201ENST00000374512 CASP9P55211 416 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 COPZ1P61923 177 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 MC1RQ01726 317 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 STARD3Q14849 445 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 SSX1Q16384 188 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 ZNF544Q6NX49 715 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 NXPE4Q6UWF7 544 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 SETD7Q8WTS6 366 aaKnown RBP17.11■□□□□ 0.33
PHF1-201ENST00000374512 SLC5A11Q8WWX8 675 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 MYLIPQ8WY64 445 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 SAMD11Q96NU1 681 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 UCK2Q9BZX2 261 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 A4GALTQ9NPC4 353 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 TDP1Q9NUW8 608 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
PHF1-201ENST00000374512 TLR4O00206 839 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 PSMD11O00231 422 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 TGFB1P01137 390 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 PDHA2P29803 388 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 TEAD2Q15562 447 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 BCL7AQ4VC05 210 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 LY6G5CQ5SRR4 150 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 LILRA3Q8N6C8 439 aaPredicted RBP17.11■□□□□ 0.33
PHF1-201ENST00000374512 OR9A1PQ8NGU1 263 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 WDR48Q8TAF3 677 aa17.11■□□□□ 0.33
PHF1-201ENST00000374512 APOBEC4Q8WW27 367 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms