RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 SEC14L3Q9UDX4 400 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 FBXW2Q9UKT8 454 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 DAPP1Q9UN19 280 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 IKBKGQ9Y6K9 419 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 A0A087WUV0 522 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 LRRC14BA6NHZ5 514 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 FCHO1O14526 889 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 CLDN1O95832 211 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 MTHFD2P13995 350 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ARL1P40616 181 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 CASP2P42575 452 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 CLCN2P51788 898 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 STX4Q12846 297 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SETDB1Q15047 1291 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ACAP2Q15057 778 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 MAPKAPK3Q16644 382 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 AP5B1Q2VPB7 878 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 MAMDC2Q7Z304 686 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 GALNTL5Q7Z4T8 443 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 LGI4Q8N135 537 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 PLD6Q8N2A8 252 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SRFBP1Q8NEF9 429 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 B3GNT7Q8NFL0 401 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 OR7G3Q8NG95 312 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF473Q8WTR7 871 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 DCAKDQ8WVC6 231 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 GPR78Q96P69 363 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 CCDC77Q9BR77 488 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 MS4A8Q9BY19 250 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 TSPAN10Q9H1Z9 355 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ACTR8Q9H981 624 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF358Q9NW07 568 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SH3BGRL2Q9UJC5 107 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 SPACA6W5XKT8 324 aa11.87□□□□□ -0.51
NPLOC4-213ENST00000573519 DOPEY2Q9Y3R5 2298 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 LRRK2Q5S007 2527 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TRGV8A0A0C4DH27 118 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 A0A1B0GUH1 482 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TRIM49D1C9J1S8 452 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TGFBR3LH3BV60 316 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SLC25A12O75746 678 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 NEURL1O76050 574 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SP1P08047 785 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TNNI3P19429 210 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 COL8A1P27658 744 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SERPINB1P30740 379 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SSR2P43308 183 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 CYB561P49447 251 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 ALDH18A1P54886 795 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 MLF1P58340 268 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 RBPJQ06330 500 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 NAA30Q147X3 362 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM35AQ53FP2 167 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 GRHL2Q6ISB3 625 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF793Q6ZN11 406 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TAOK1Q7L7X3 1001 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 UBE3DQ7Z6J8 389 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 LAS2Q8IYD9 372 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 RNF175Q8N4F7 328 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 ACOT4Q8N9L9 421 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 NCLNQ969V3 563 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM125Q96AQ2 219 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 CMTM7Q96FZ5 175 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 VMP1Q96GC9 406 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 MTERF1Q99551 399 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 MAPKAP1Q9BPZ7 522 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 TBCDQ9BTW9 1192 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 OR51B5Q9H339 312 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 ADAP2Q9NPF8 381 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 CLCA3PQ9Y6N3 262 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
NPLOC4-213ENST00000573519 EXOC1LA0A1B0GW35 172 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 CCDC189A1A4V9 331 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 CYR61O00622 381 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 RIPK2O43353 540 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 CTNSO60931 367 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 LDB3O75112 727 aa11.85□□□□□ -0.51
NPLOC4-213ENST00000573519 KRT38O76015 456 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms