RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TXNL4BQ9NX01 149 aaKnown RBP16.85■□□□□ 0.29
RAB40C-205ENST00000539661 PCDH10Q9P2E7 1040 aa16.85■□□□□ 0.29
RAB40C-205ENST00000539661 B4GALT3O60512 393 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 NOS1APO75052 506 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 GASTP01350 101 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 IDSP22304 550 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 SGSHP51688 502 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 AP1S2P56377 157 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 TATDN3Q17R31 274 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ESCO2Q56NI9 601 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 MORN1Q5T089 497 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF648Q5T619 568 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 MZT2BQ6NZ67 158 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 CAMKK1Q8N5S9 505 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 FBXO22Q8NEZ5 403 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 PLD4Q96BZ4 506 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 BRF2Q9HAW0 419 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 CLEC2DQ9UHP7 191 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 B8ZZF3 427 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 OR2B3O76000 313 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ADAP00813 363 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 CSF2P04141 144 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 HBQ1P09105 142 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 C1SP09871 688 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 CCR7P32248 378 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 RAB25P57735 213 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 IRF8Q02556 426 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 HNRNPA0Q13151 305 aaKnown RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 CDKN3Q16667 212 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF770Q6IQ21 691 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 IDO2Q6ZQW0 420 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF280BQ86YH2 543 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 RNF175Q8N4F7 328 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ANKRA2Q9H9E1 313 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 NMNAT1Q9HAN9 279 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 RBFOX1Q9NWB1 397 aaKnown RBP16.84■□□□□ 0.29
RAB40C-205ENST00000539661 ZDHHC3Q9NYG2 299 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 KCNN3Q9UGI6 736 aa16.84■□□□□ 0.29
RAB40C-205ENST00000539661 A0A1W2PQ72 361 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 UPK3BL1B0FP48 263 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 UPK3BL2E5RIL1 263 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 J3KTA2 159 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 SLC10A3P09131 477 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 ETFAP13804 333 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF30P17039 623 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 HOXC5Q00444 222 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 SEPT5Q99719 369 aaPredicted RBP16.83■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF717Q9BY31 904 aaPredicted RBP16.83■□□□□ 0.29
RAB40C-205ENST00000539661 BHLHE41Q9C0J9 482 aaPredicted RBP16.83■□□□□ 0.29
RAB40C-205ENST00000539661 GPATCH2Q9NW75 528 aa16.83■□□□□ 0.29
RAB40C-205ENST00000539661 CLDN7O95471 211 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 MSL3P1P0C860 447 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 OSMP13725 252 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ILKQ13418 452 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 MRPL58Q14197 206 aaKnown RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF630Q2M218 657 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF628Q5EBL2 1059 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 OXR1Q8N573 874 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 HJURPQ8NCD3 748 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 NFKBIDQ8NI38 313 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 B3GNT2Q9NY97 397 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 KCND3Q9UK17 655 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ALG5Q9Y673 324 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 MTMR11A4FU01 709 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 MYL12BO14950 172 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ANXA4P09525 319 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ITPKAP23677 461 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 PTBP1P26599 531 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 TGM4P49221 684 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 RAE1P78406 368 aaKnown RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 EEF1A2Q05639 463 aaKnown RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 KCNC3Q14003 757 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 BTBD16Q32M84 506 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 COX20Q5RI15 118 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 ATXN7L2Q5T6C5 722 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 METAP1DQ6UB28 335 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-205ENST00000539661 GLB1LQ6UWU2 654 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 IL4I1Q96RQ9 567 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 SNX11Q9Y5W9 270 aa16.83■□□□□ 0.28
RAB40C-205ENST00000539661 RANBP2P49792 3224 aaKnown RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 TEX51A0A1B0GUA7 166 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 GFYI3L273 518 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 SRPRAP08240 638 aaKnown RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 ACADMP11310 421 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 CPEP16870 476 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 POU1F1P28069 291 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 OR1G1P47890 313 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 PFN3P60673 137 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 PPP3R1P63098 170 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 MXD1Q05195 221 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 OCLNQ16625 522 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 C12orf73Q69YU5 71 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 TRIM40Q6P9F5 258 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 ANGPTL8Q6UXH0 198 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 PAMR1Q6UXH9 720 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms