RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ZNF860A6NHJ4 632 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 LRATO95237 230 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 HPNP05981 417 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 CD8BP10966 210 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MAOAP21397 527 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 CHMP24386 653 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 TTKP33981 857 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PCGF2P35227 344 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 HCAR3P49019 387 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 CDK9P50750 372 aaKnown RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PNLIPRP1P54315 467 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 NAGLUP54802 743 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PHC1P78364 1004 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 BTG2P78543 158 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 IRF9Q00978 393 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MEF2AQ02078 507 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 CCNIQ14094 377 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PTPRCAPQ14761 206 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 NOMO1Q15155 1222 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ZSWIM7Q19AV6 140 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 FAM182AQ5T1J6 154 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 HECTD2Q5U5R9 776 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 FAHD2BQ6P2I3 314 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 TRIM65Q6PJ69 517 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 SCIMPQ6UWF3 145 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ENPP6Q6UWR7 440 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 RBMS3Q6XE24 437 aaKnown RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 C1orf229Q6ZS94 237 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MUC15Q8N387 334 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 SIGLECL1Q8N7X8 197 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 SYT14Q8NB59 555 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 LINC00301Q8NCQ3 95 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ZNF540Q8NDQ6 660 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 OR5T3Q8NGG3 340 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 SLC30A5Q8TAD4 765 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PPP1R14AQ96A00 147 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 FAHD2AQ96GK7 314 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 OR1F2PQ96R84 312 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PEBP4Q96S96 227 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 DOHHQ9BU89 302 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ACAT2Q9BWD1 397 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ZWILCHQ9H900 591 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 LPAR2Q9HBW0 351 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PROK2Q9HC23 129 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MOCS1Q9NZB8 636 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MYO1AQ9UBC5 1043 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 AMACRQ9UHK6 382 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 ZDHHC2Q9UIJ5 367 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 CRLS1Q9UJA2 301 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MID2Q9UJV3 735 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 PROCRQ9UNN8 238 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 MMP24Q9Y5R2 645 aa5.89□□□□□ -1.47
HDAC3-206ENST00000471968 EXPH5Q8NEV8 1989 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NINQ8N4C6 2090 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NPIPA5A0A0B4J1W7 369 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 ANKRD62A6NC57 917 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 SHISA9B4DS77 424 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 B4DSR2 109 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NPIPA7E9PJI5 369 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 LIN7AO14910 233 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-206ENST00000471968 PHF2O75151 1096 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 C1QAP02745 245 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NEFLP07196 543 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 MMEP08473 750 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NPIPA8P0DM63 369 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CPN1P15169 458 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 IL10P22301 178 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 JAK1P23458 1154 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 SERPINB6P35237 376 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 GRK3P35626 688 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 GPR143P51810 404 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 HK2P52789 917 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 KRTAP10-3P60369 221 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 DOC2AQ14183 400 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 GRB7Q14451 532 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.88□□□□□ -1.47
HDAC3-206ENST00000471968 DEFB121Q5J5C9 76 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 OR2A2Q6IF42 318 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CCDC70Q6NSX1 233 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 OPN5Q6U736 354 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 SBSNQ6UWP8 590 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 PDSS2Q86YH6 399 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CDKL3Q8IVW4 592 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-206ENST00000471968 ZNF619Q8N2I2 560 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 OR2A1Q8NGT9 310 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CFAP61Q8NHU2 1237 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-206ENST00000471968 ELMO1Q92556 727 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 TMEM186Q96B77 213 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 TBC1D20Q96BZ9 403 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 LRRC58Q96CX6 371 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 MCEEQ96PE7 176 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 COPS8Q99627 209 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 MACROD1Q9BQ69 325 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 ANKHQ9HCJ1 492 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 NGBQ9NPG2 151 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 HEY2Q9UBP5 337 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms