RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GTF2H2Q13888 395 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 EXOC3L2Q2M3D2 409 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 FAM74A3Q4VXF1 159 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 PLA1AQ53H76 456 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 NHLRC3Q5JS37 347 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 DGKKQ5KSL6 1271 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 GTF2H2CQ6P1K8 395 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 ZNF704Q6ZNC4 412 aaPredicted RBP12.26□□□□□ -0.45
HERC3-203ENST00000407637 OR4N4Q8N0Y3 316 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 FTMTQ8N4E7 242 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 B3GALNT2Q8NCR0 500 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 SPPL2AQ8TCT8 520 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 LINGO1Q96FE5 620 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 SLC25A51Q9H1U9 297 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 COPZ2Q9P299 210 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 FBXL2Q9UKC9 423 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 A8MXK9 166 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 LRATO95237 230 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 LPLP06858 475 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 CNR2P34972 360 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
HERC3-203ENST00000407637 CRYBA2P53672 197 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 MAD2L1Q13257 205 aaPredicted RBP12.26□□□□□ -0.45
HERC3-203ENST00000407637 EEF1AKMT1Q8WVE0 214 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 IMP4Q96G21 291 aaKnown RBP12.26□□□□□ -0.45
HERC3-203ENST00000407637 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 OR51J1Q9H342 316 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 LRTM1Q9HBL6 345 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 C11orf16Q9NQ32 467 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 PHF11Q9UIL8 331 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 RAI2Q9Y5P3 530 aa12.26□□□□□ -0.45
HERC3-203ENST00000407637 KLRG2A4D1S0 409 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 TUBAL3A6NHL2 446 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 LANCL1O43813 399 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 NCR1O76036 304 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 DHFRP00374 187 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 LALBAP00709 142 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RPL17P18621 184 aaKnown RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 ATP12AP54707 1039 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RBBP4Q09028 425 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 MLLT11Q13015 90 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 MPP7Q5T2T1 576 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 METTL23Q86XA0 190 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 OR4L1Q8NH43 312 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 OTUB1Q96FW1 271 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 MED10Q9BTT4 135 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 KATNAL1Q9BW62 490 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 ACTR10Q9NZ32 417 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 DLGAP4Q9Y2H0 992 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 SNX11Q9Y5W9 270 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RALGAPA2Q2PPJ7 1873 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 PHIPQ8WWQ0 1821 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 LOC285095A0A1B0GVY8 99 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 WASH4PA8MWX3 477 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 CLIC1O00299 241 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 YKT6O15498 198 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 NIPSNAP2O75323 286 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 APOC1P02654 83 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 APOC3P02656 99 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 PIPP12273 146 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 ENGP17813 658 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RHCEP18577 417 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 POU3F2P20265 443 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 WARSP23381 471 aaKnown RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 PBX3P40426 434 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 MEOX2P50222 304 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RPS25P62851 125 aaKnown RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 CDKL4Q5MAI5 379 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 RGS7BPQ6MZT1 257 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 TMEM91Q6ZNR0 172 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 TAC4Q86UU9 113 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 TMEM163Q8TC26 289 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 TM9SF4Q92544 642 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 TSSK3Q96PN8 268 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 DPH7Q9BTV6 452 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 NFKBIZQ9BYH8 718 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 NDUFAF4Q9P032 175 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 UXTQ9UBK9 157 aaPredicted RBP12.25□□□□□ -0.45
HERC3-203ENST00000407637 SPATA2Q9UM82 520 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 PPT2Q9UMR5 302 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 CCDC88CQ9P219 2028 aa12.25□□□□□ -0.45
HERC3-203ENST00000407637 ABCD4O14678 606 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 GJB3O75712 270 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 MMP2P08253 660 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ANXA8P13928 327 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 CHRNA5P30532 468 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 BDKRB1P46663 353 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 EVX1P49640 407 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 BLVRAP53004 296 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms