RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ANKRD66B4E2M5 251 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ATP6V1G2-DDX39BF2Z307 99 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLC30A4O14863 429 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MATN4O95460 622 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 XKP51811 444 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CTBP2P56545 445 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLC35A2P78381 396 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SMAD3P84022 425 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 TDGQ13569 410 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 BRMS1LQ5PSV4 323 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 DCST1Q5T197 706 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLC39A5Q6ZMH5 540 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TSPAN33Q86UF1 283 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 OR10H4Q8NGA5 316 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ASB15Q8WXK1 588 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 RNF31Q96EP0 1072 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 NTMT1Q9BV86 223 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TSSK6Q9BXA6 273 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 NUSAP1Q9BXS6 441 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 FXYD6Q9H0Q3 95 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 C11orf49Q9H6J7 331 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TM9SF3Q9HD45 589 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLC35C2Q9NQQ7 365 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 C8orf4Q9NR00 106 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 BAIAP2Q9UQB8 552 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 SIGLEC5O15389 551 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PRAMEF12O95522 483 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 C8orf89P0DMQ9 161 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CD72P21854 359 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 HTR3AP46098 478 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 BDKRB1P46663 353 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TUBA1BP68363 451 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 RHAGQ02094 409 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SIGLEC14Q08ET2 396 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 INSL4Q14641 139 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 RFLNAQ6ZTI6 216 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TUBA1AQ71U36 451 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ZSWIM9Q86XI8 627 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CD200R1Q8TD46 325 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CIDECQ96AQ7 238 aaPredicted RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 EFHD2Q96C19 240 aaPredicted RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 FOPNLQ96NB1 174 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 KCNK12Q9HB15 430 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 NUDT4Q9NZJ9 180 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SESN1Q9Y6P5 492 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MAU2Q9Y6X3 613 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 DHFRP00374 187 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 POLR2EP19388 210 aaKnown RBP8.46□□□□□ -1.05
RTN4-206ENST00000394611 HOXC8P31273 242 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 NOXRED1Q6NXP6 359 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 CNIH2Q6PI25 160 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 KDELC1Q6UW63 502 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 CFAP77Q6ZQR2 320 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 COMMD7Q86VX2 200 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 MON1AQ86VX9 555 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 RBFAQ8N0V3 343 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 BTN2A3PQ96KV6 586 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 RBCK1Q9BYM8 510 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 NARFLQ9H6Q4 476 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 RNF121Q9H920 327 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 PADI3Q9ULW8 664 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 ALG5Q9Y673 324 aa8.46□□□□□ -1.05
RTN4-206ENST00000394611 FAM183AA6NL82 134 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 PLK4O00444 970 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 E2F3O00716 465 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 ANKRD28O15084 1053 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 UGT2B17O75795 530 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 KLK1P06870 262 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 CLTBP09497 229 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 CD3GP09693 182 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 WARSP23381 471 aaKnown RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 RYKP34925 604 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 ATP5C1P36542 298 aaKnown RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 ACVR1BP36896 505 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 PIN1Q13526 163 aaPredicted RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 FCRLBQ6BAA4 426 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 LAIR1Q6GTX8 287 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 WDR53Q7Z5U6 358 aaPredicted RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 FAM20CQ8IXL6 584 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 LINC01465Q8N7H1 131 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 SLC43A3Q8NBI5 491 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 TXNDC15Q96J42 360 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 KCTD7Q96MP8 289 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 ACPTQ9BZG2 426 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 TMPRSS11EQ9UL52 423 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 NCKAP1Q9Y2A7 1128 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 PRSS21Q9Y6M0 314 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 PSMD9O00233 223 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 KPNA3O00505 521 aaPredicted RBP8.46□□□□□ -1.06
RTN4-206ENST00000394611 FABP7O15540 132 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 GJB5O95377 273 aa8.46□□□□□ -1.06
RTN4-206ENST00000394611 INHBBP09529 407 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms