RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 IKBIPQ70UQ0 350 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 SLC44A2Q8IWA5 706 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 LRRC56Q8IYG6 542 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 SYTL1Q8IYJ3 562 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 GPR65Q8IYL9 337 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 AQP11Q8NBQ7 271 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 WDR48Q8TAF3 677 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 CD99L2Q8TCZ2 262 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 PIK3R3Q92569 461 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 GTPBP3Q969Y2 492 aaKnown RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 ZNF689Q96CS4 500 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 FOPNLQ96NB1 174 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 CCDC32Q9BV29 185 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 HOXD1Q9GZZ0 328 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 SMG9Q9H0W8 520 aaKnown RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 EPHX3Q9H6B9 360 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 NMNAT1Q9HAN9 279 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 TRIM39Q9HCM9 518 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 FBXL12Q9NXK8 326 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 SPG21Q9NZD8 308 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 ICKQ9UPZ9 632 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 ANGPT4Q9Y264 503 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 CAB39Q9Y376 341 aaPredicted RBP8.32□□□□□ -1.08
CLK1-201ENST00000321356 TSC22D4Q9Y3Q8 395 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
CLK1-201ENST00000321356 CCDC88CQ9P219 2028 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 ZNF197O14709 1029 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 FFAR1O14842 300 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 ASNA1O43681 348 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 OXSR1O95747 527 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 ADAP00813 363 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 GASTP01350 101 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 DNTTP04053 509 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 GBAP04062 536 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 IFNW1P05000 195 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 POU2F1P14859 743 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 GJA1P17302 382 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 ALOX12P18054 663 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 CNR2P34972 360 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 CHI3L1P36222 383 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 RECQLP46063 649 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 TAS2R50P59544 299 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 RHAGQ02094 409 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLK1-201ENST00000321356 PUM1Q14671 1186 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLK1-201ENST00000321356 TSTQ16762 297 aaKnown RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 SPANXN2Q5MJ10 180 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 ZNF362Q5T0B9 420 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 TMEM215Q68D42 235 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 PTCHD4Q6ZW05 846 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 DEFB128Q7Z7B8 93 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 KIAA0907Q7Z7F0 614 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 NLGN4XQ8N0W4 816 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 GALNT6Q8NCL4 622 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 FAM46DQ8NEK8 389 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 IL17RDQ8NFM7 739 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 OR5AK3PQ8NH89 298 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 PDXPQ96GD0 296 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 HHIPL1Q96JK4 782 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 MRGPRX3Q96LB0 322 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 DHRS1Q96LJ7 313 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 OPALINQ96PE5 141 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 TRNT1Q96Q11 434 aaKnown RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 CORO1BQ9BR76 489 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 TMEM121BQ9BXQ6 578 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 SPNS1Q9H2V7 528 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 OR51B5Q9H339 312 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 HHATLQ9HCP6 504 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLK1-201ENST00000321356 CLN6Q9NWW5 311 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 EHD3Q9NZN3 535 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 REV1Q9UBZ9 1251 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 KLHL3Q9UH77 587 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 RAB23Q9ULC3 237 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
CLK1-201ENST00000321356 NUP210Q8TEM1 1887 aaPredicted RBP8.31□□□□□ -1.08
CLK1-201ENST00000321356 LTBP2Q14767 1821 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 TRBV4-1A0A0J9YWV2 114 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 A0A1W2PRB8 838 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 NEDD8-MDP1E9PL57 170 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 H3BM21 787 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 TGM5O43548 720 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 PQBP1O60828 265 aaKnown RBP8.3□□□□□ -1.08
CLK1-201ENST00000321356 LILRB5O75023 590 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 GPX5O75715 221 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 TGFB1P01137 390 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 SCG5P05408 212 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 CTSLP07711 333 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 HSMCR30P0CW71 290 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 UQCRC2P22695 453 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 MMP12P39900 470 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 LIM2P55344 173 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 DEFA1P59665 94 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 DEFA3P59666 94 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 DSTNP60981 165 aa8.3□□□□□ -1.08
CLK1-201ENST00000321356 GANABQ14697 944 aaKnown RBP8.3□□□□□ -1.08
CLK1-201ENST00000321356 DUSP7Q16829 419 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms