RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CERS6Q6ZMG9 384 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 USP45Q70EL2 814 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 NT5DC3Q86UY8 548 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADHFE1Q8IWW8 467 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GCNT2Q8N0V5 402 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM58AQ8N1B3 248 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 D2HGDHQ8N465 521 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR5T2Q8NGG2 359 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR14K1Q8NGZ2 314 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2V1Q8NHB1 315 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAP4K1Q92918 833 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 TESCQ96BS2 214 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 R3HDM4Q96D70 268 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNFT2Q96EX2 444 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 NECTIN4Q96NY8 510 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GCNAQ96QF7 691 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 TEAD3Q99594 435 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDCA3Q99618 268 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRRT1Q99946 306 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 SOX7Q9BT81 388 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 POLDIP3Q9BY77 421 aaKnown RBP4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 OSBPL8Q9BZF1 889 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 RTN4RQ9BZR6 473 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GANQ9H2C0 597 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 PPA2Q9H2U2 334 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 ASB7Q9H672 318 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 LTB4R2Q9NPC1 389 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 OLFML3Q9NRN5 406 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 PNO1Q9NRX1 252 aaKnown RBP4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABCC13Q9NSE7 274 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GIMAP4Q9NUV9 329 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 MS4A12Q9NXJ0 267 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GTSE1Q9NYZ3 720 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 CHRNA9Q9UGM1 479 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 GLS2Q9UI32 602 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 UTS2RQ9UKP6 389 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 MKLN1Q9UL63 735 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDH7Q9ULB5 785 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 MGAT4AQ9UM21 535 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDC14AQ9UNH5 594 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 TP53TG5Q9Y2B4 290 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEKHA6Q9Y2H5 1048 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCNK7Q9Y2U2 307 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 EDC4Q6P2E9 1401 aaKnown RBP4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 PTPRUQ92729 1446 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADGRL3Q9HAR2 1447 aa4.54□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABCC4O15439 1325 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SPATA31A1Q5TZJ5 1347 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SALL1Q9NSC2 1324 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1B0GV90 55 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1W2PPC1 479 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1W2PPV4 95 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1W2PRB8 838 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PIPSLA2A3N6 862 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 HELTA6NFD8 242 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GLOD5A6NK44 160 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM25AB3EWG3 89 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM25CB3EWG5 89 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM25GB3EWG6 89 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCDC188H7C350 402 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 HAS3O00219 553 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC33A1O00400 549 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABCD4O14678 606 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPAA1O43292 621 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GRID2O43424 1007 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 BUD23O43709 281 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRKYO43930 277 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RAMP2O60895 175 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 N4BP1O75113 896 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GATBO75879 557 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 DCTN3O75935 186 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 AKAP3O75969 853 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 LYNP07948 512 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ITGA5P08648 1049 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABHD2P08910 425 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 THRAP10827 490 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC2A1P11166 492 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ITIH1P19827 911 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF10P21506 573 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 IGFBP5P24593 272 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 DNASE1P24855 282 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 MPIP34949 423 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCNJ3P48549 501 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 JAK3P52333 1124 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAP2K6P52564 334 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RPL26P61254 145 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RBX1P62877 108 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 NHLH1Q02575 133 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PDZK1IP1Q13113 114 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 MADCAM1Q13477 382 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 OLIG2Q13516 323 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ATP1A4Q13733 1029 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 TFDP1Q14186 410 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 IRF4Q15306 451 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM189A2Q15884 450 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC15A2Q16348 729 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FSCN1Q16658 493 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ME3Q16798 604 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SYT16Q17RD7 645 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms