RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 SNTG1Q9NSN8 517 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TUBA8Q9NY65 449 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 ATP6V1HQ9UI12 483 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 IRAK3Q9Y616 596 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 PRRT4C9JH25 899 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TLX2O43763 284 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 MFN2O95140 757 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 APODP05090 189 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 PTX3P26022 381 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 HOXC5Q00444 222 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 NCF4Q15080 339 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TMEM215Q68D42 235 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 ADIPOR2Q86V24 386 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 SLC35G5Q96KT7 338 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 MAGEB10Q96LZ2 347 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TBX5Q99593 518 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TRIM45Q9H8W5 580 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 CLEC4AQ9UMR7 237 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 EDDM13A0A1B0GTR0 161 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 KRBA1A5PL33 1030 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 CACNB4O00305 520 aaPredicted RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 KCNK5O95279 499 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 CTSLP07711 333 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 RETP07949 1114 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 ELAVL3Q14576 367 aaKnown RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 CLCA4Q14CN2 919 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 TSTQ16762 297 aaKnown RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 NXPE4Q6UWF7 544 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 Q6ZNB5 142 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 C12orf40Q86WS4 652 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 PLA2G15Q8NCC3 412 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 ADAMTS15Q8TE58 950 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 SLC2A11Q9BYW1 496 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 SLC6A17Q9H1V8 727 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 MRPS30Q9NP92 439 aaKnown RBP12.02□□□□□ -0.49
UBXN4-201ENST00000272638 CA5BQ9Y2D0 317 aa12.02□□□□□ -0.49
UBXN4-201ENST00000272638 ALPK2Q86TB3 2170 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 RFXAPO00287 272 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 AP1G1O43747 822 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 AP2A2O94973 939 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 KRT8P05787 483 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 IGFBP4P22692 258 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 CCR4P51679 360 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 DEFA1P59665 94 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 DEFA3P59666 94 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 SLC13A2Q13183 592 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 C5orf22Q49AR2 442 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ZNF730Q6ZMV8 503 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ABHD11Q8NFV4 315 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 IL1RAPQ9NPH3 570 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 KLHL1Q9NR64 748 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 MAT2BQ9NZL9 334 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 MIA3Q5JRA6 1907 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 PCDH17O14917 1159 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 C1orf105O95561 183 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 RB1P06400 928 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 PRR35P0CG20 571 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 HTR1BP28222 390 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 SLC19A1P41440 591 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 CSRP3P50461 194 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 MESP2Q0VG99 397 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 PIN1Q13526 163 aaPredicted RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ARMC6Q6NXE6 501 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 IQCHQ86VS3 1027 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ZNF761Q86XN6 746 aaPredicted RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ZZZ3Q8IYH5 903 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 GOLM1Q8NBJ4 401 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 M0R3H8 397 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 WISP3O95389 354 aaPredicted RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 CAMK1Q14012 370 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ZNF829Q3KNS6 432 aaPredicted RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 GRHL2Q6ISB3 625 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 NUDT13Q86X67 352 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 LGALS12Q96DT0 336 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 MTERF3Q96E29 417 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ZBED6CLQ96FA7 236 aaPredicted RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
UBXN4-201ENST00000272638 ABCG4Q9H172 646 aa12.01□□□□□ -0.49
UBXN4-201ENST00000272638 MICAL3Q7RTP6 2002 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 LRRC72A6NJI9 287 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 KAT7O95251 611 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 CD22P20273 847 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 RGS8P57771 180 aaPredicted RBP12□□□□□ -0.49
UBXN4-201ENST00000272638 TAP2Q03519 686 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 SOWAHCQ53LP3 525 aaPredicted RBP12□□□□□ -0.49
UBXN4-201ENST00000272638 CRB2Q5IJ48 1285 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 SHFQ7M4L6 423 aa12□□□□□ -0.49
UBXN4-201ENST00000272638 C6orf120Q7Z4R8 191 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms