RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TPSAB1Q15661 275 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 GALNT15Q8N3T1 639 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 LENG8Q96PV6 779 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ETAA1Q9NY74 926 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 B3GNT2Q9NY97 397 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 POFUT2Q9Y2G5 429 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 WNT9AO14904 365 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ERCC1P07992 297 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 HTR1AP08908 422 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 NDST2P52849 883 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 NAA20P61599 178 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 OR4F3Q6IEY1 312 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 BSCL2Q96G97 398 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 FUZQ9BT04 418 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 OR51I1Q9H343 314 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 CFL2Q9Y281 166 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 OR6C74A6NCV1 312 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 EDF1O60869 148 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 C8GP07360 202 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GRIA1P42261 906 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 KCNQ1P51787 676 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 DECR1Q16698 335 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GCDHQ92947 438 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 C12orf43Q96C57 262 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 ZBED6CLQ96FA7 236 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 OXSMQ9NWU1 459 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 NLGN3Q9NZ94 848 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 CNTN3Q9P232 1028 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC1A7O00341 560 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 CDRT1O95170 752 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SIX3O95343 332 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 DAOAP59103 153 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 RSU1Q15404 277 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GALNT12Q8IXK2 581 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC43A2Q8N370 569 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 HSFX1Q9UBD0 423 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GJD2Q9UKL4 321 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GPR34Q9UPC5 381 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 CLDN25C9JDP6 229 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 LILRB5O75023 590 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 UBE2NP61088 152 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC10A6Q3KNW5 377 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 LACTB2Q53H82 288 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 TRMT10BQ6PF06 316 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 AQP11Q8NBQ7 271 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 MICU1Q9BPX6 476 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 C17orf62Q9BQA9 187 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 C11orf84Q9BUA3 381 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 MAGEH1Q9H213 219 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SALL3Q9BXA9 1300 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 PDLIM1O00151 329 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SERPINA7P05543 415 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 POLR2HP52434 150 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 E2F1Q01094 437 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 NTRK2Q16620 822 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 IFI44LQ53G44 452 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 PRR22Q8IZ63 422 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC2A6Q9UGQ3 507 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SORCS3Q9UPU3 1222 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 GABRA3P34903 492 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 IRF5Q13568 498 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 TDGQ13569 410 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF610Q8N9Z0 462 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 METTL2AQ96IZ6 378 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 DUSP26Q9BV47 211 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 KCNK13Q9HB14 408 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 STARD5Q9NSY2 213 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 LAMTOR5O43504 91 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 PREPP48147 710 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC37A3Q8NCC5 494 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 BBS1Q8NFJ9 593 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 DCAKDQ8WVC6 231 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 PITX2Q99697 317 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 OR51B5Q9H339 312 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 EDARQ9UNE0 448 aa16.42■□□□□ 0.22
CACNA1A-253ENST00000637927 MEIS3P1A6NDR6 274 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 HRGP04196 525 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 H2BFMP0C1H6 154 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 GTF2F2P13984 249 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 ACAD8Q9UKU7 415 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 NUMA1Q14980 2115 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 RPS13P62277 151 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF616Q08AN1 781 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 STEAP3Q658P3 488 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 P2RY8Q86VZ1 359 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 SLITRK4Q8IW52 837 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 CMTM8Q8IZV2 173 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 FANK1Q8TC84 345 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 RAB8BQ92930 207 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 MND1Q9BWT6 205 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 POLR2J3Q9H1A7 115 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms