RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 LRRC3CA6NJW4 275 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 B4DGG1 531 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRSS44E7EML9 344 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 TRIM77I1YAP6 450 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMEM189-UBE2V1I3L0A0 370 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PTGESO14684 152 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PLPP2O43688 288 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 RANBP6O60518 1105 aaKnown RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PGLSO95336 258 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRAMEF12O95522 483 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 CH25HO95992 272 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 LDLRP01130 860 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 C9P02748 559 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 RLN1P04808 185 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 POLR2MP0CAP2 368 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PTPN3P26045 913 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ST8SIA6P61647 398 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 BNC1Q01954 994 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 TWF1Q12792 350 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 RPA4Q13156 261 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 CBX3Q13185 183 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ILKQ13418 452 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 CTTNQ14247 550 aaKnown RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 QRICH1Q2TAL8 776 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF284Q2VY69 593 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 MDH1BQ5I0G3 518 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KCNT1Q5JUK3 1230 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 GCNT6Q5T4J0 391 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC18B1Q6NT16 456 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF367Q7RTV3 350 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 CATSPER4Q7RTX7 472 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 VASH2Q86V25 355 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 NRROSQ86YC3 692 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ARL14Q8N4G2 192 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 NAT8LQ8N9F0 302 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 C7orf57Q8NEG2 295 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRT35Q92764 455 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 MUS81Q96NY9 551 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ATP6V0BQ99437 205 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PCYT2Q99447 389 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FEVQ99581 238 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 GFI1Q99684 422 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FUCA2Q9BTY2 467 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 LMF2Q9BU23 707 aaKnown RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FNDC11Q9BVV2 318 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PANK2Q9BZ23 570 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 GCOM2Q9BZD3 368 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KCNN2Q9H2S1 579 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FOXP1Q9H334 677 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 RIOX1Q9H6W3 641 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 SEBOXQ9HB31 216 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZDHHC4Q9NPG8 344 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 DNAJC17Q9NVM6 304 aaKnown RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 TRPC4Q9UBN4 977 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ERRFI1Q9UJM3 462 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 FZD10Q9ULW2 581 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 KCNK7Q9Y2U2 307 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 PTPRCP08575 1304 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 ANK1P16157 1881 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 A0A1W2PPQ1 181 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 HEATR9A2RTY3 570 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 C5orf52A6NGY3 159 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ARL5CA6NH57 179 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 RNF212BA8MTL3 300 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 NDUFB8O95169 186 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 PLA2G4BP0C869 781 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 PDHBP11177 359 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 GNAZP19086 355 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 HOXD9P28356 352 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 HSD17B3P37058 310 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ARHGAP25P42331 645 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 COMPP49747 757 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 NT5C2P49902 561 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ART1P52961 327 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ACTN3Q08043 901 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 DSC1Q08554 894 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 PLA2G7Q13093 441 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 PTGR1Q14914 329 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 TGIF1Q15583 401 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 C14orf28Q4W4Y0 310 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 LACTB2Q53H82 288 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 LRRC73Q5JTD7 316 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 TYW3Q6IPR3 259 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF704Q6ZNC4 412 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 MRPL10Q7Z7H8 261 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 DSG4Q86SJ6 1040 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 SIAH3Q8IW03 269 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 C1orf52Q8N6N3 182 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 RDM1Q8NG50 284 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms