RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 BTN3A2P78410 334 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 KLRB1Q12918 225 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 CCDC153Q494R4 210 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 GGTA1PQ4G0N0 100 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 MREGQ8N565 214 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 PLPP5Q8NEB5 264 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 FDCSPQ8NFU4 85 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF473Q8WTR7 871 aaKnown RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 PEX11GQ96HA9 241 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 TBCDQ9BTW9 1192 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 TUBB6Q9BUF5 446 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ERVK-6Q9BXR3 956 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 MS4A8Q9BY19 250 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 KLHL31Q9H511 634 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF71Q9NQZ8 489 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 PSD3Q9NYI0 1048 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 PPT2Q9UMR5 302 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 IGHV1-45A0A0A0MS14 117 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 BLACEA4D250 179 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF860A6NHJ4 632 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 DPM1O60762 260 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 COX6A1P12074 109 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 SLCO1A2P46721 670 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 ERCC6LQ2NKX8 1250 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 ABHD17CQ6PCB6 329 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 QSOX2Q6ZRP7 698 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 VN1R5Q7Z5H4 357 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 KBTBD2Q8IY47 623 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 TMEM151AQ8N4L1 468 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 EPS8L3Q8TE67 593 aaKnown RBP17.46■□□□□ 0.39
CHTOP-202ENST00000368687 PPP4R1Q8TF05 950 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 LHPPQ9H008 270 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF700Q9H0M5 742 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 NOL11Q9H8H0 719 aaKnown RBP17.46■□□□□ 0.39
CHTOP-202ENST00000368687 TMEM216Q9P0N5 145 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 MID2Q9UJV3 735 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 RAB21Q9UL25 225 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 GRID1Q9ULK0 1009 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 MMACHCQ9Y4U1 282 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 SPACA6W5XKT8 324 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 DOCK10Q96BY6 2186 aa17.46■□□□□ 0.39
CHTOP-202ENST00000368687 PCSK5Q92824 1860 aa17.46■□□□□ 0.38
CHTOP-202ENST00000368687 A6NL46 340 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 SMIM23A6NLE4 172 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 GOLGA8RI6L899 631 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 FOXE1O00358 373 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 CLDN4O14493 209 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 MLYCDO95822 493 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 PTX3P26022 381 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 CRHR1P34998 444 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 PLA2G16P53816 162 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 SNRPNP63162 240 aaKnown RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 ABRAXAS2Q15018 415 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 NSDHLQ15738 373 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 AGAP7PQ5VUJ5 663 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 KHDRBS2Q5VWX1 349 aaKnown RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 JMJD6Q6NYC1 403 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 CPEB2Q7Z5Q1 589 aaKnown RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 TEX19Q8NA77 164 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 OR5T3Q8NGG3 340 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 HUS1BQ8NHY5 278 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 RDH11Q8TC12 318 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 ZNF483Q8TF39 744 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-202ENST00000368687 AGAP4Q96P64 663 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 PARD6BQ9BYG5 372 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 LYRM4Q9HD34 91 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 LANCL2Q9NS86 450 aa17.45■□□□□ 0.38
CHTOP-202ENST00000368687 PRMT3O60678 531 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 JRKO75564 520 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 SERPINA7P05543 415 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 RAP1GDS1P52306 607 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 RHAGQ02094 409 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 CUL3Q13618 768 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 EXT1Q16394 746 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 CPSF6Q16630 551 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHTOP-202ENST00000368687 AP5B1Q2VPB7 878 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 DEPDC1Q5TB30 811 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 IGFL3Q6UXB1 125 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 ATG14Q6ZNE5 492 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 CA13Q8N1Q1 262 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 RGMAQ96B86 450 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 C8orf44Q96CB5 159 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 QRFPRQ96P65 431 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 NUDT9Q9BW91 350 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 IQCGQ9H095 443 aaKnown RBP17.44■□□□□ 0.38
CHTOP-202ENST00000368687 ZNF160Q9HCG1 818 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 DMRT3Q9NQL9 472 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 PRDM9Q9NQV7 894 aa17.44■□□□□ 0.38
CHTOP-202ENST00000368687 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHTOP-202ENST00000368687 V9GYY5 206 aaPredicted RBP17.44■□□□□ 0.38
CHTOP-202ENST00000368687 LRRC14BA6NHZ5 514 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 H3BQF6 201 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 COPEO14579 308 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 OR7A17O14581 309 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 SUV39H1O43463 412 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 SCELO95171 688 aa17.43■□□□□ 0.38
CHTOP-202ENST00000368687 TBX6O95947 436 aaPredicted RBP17.43■□□□□ 0.38
CHTOP-202ENST00000368687 SBK3P0C264 359 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms