RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ERN2Q76MJ5 926 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC15A3Q8IY34 581 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 MAPK15Q8TD08 544 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 FBXL8Q96CD0 374 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 FZD4Q9ULV1 537 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC22A14Q9Y267 594 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 FAM237AA0A1B0GTK4 181 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 H7C1Q1 480 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ITGA10O75578 1167 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 RUNDC3AQ59EK9 446 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF773Q6PK81 442 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 BTBD1Q9H0C5 482 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF254O75437 659 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 XRCC1P18887 633 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 TM4SF1P30408 202 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ACVRL1P37023 503 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 GSTM4Q03013 218 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 FSCN2O14926 492 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ARG2P78540 354 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 EIPR1Q53HC9 387 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 PQLC1Q8N2U9 271 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 STK35Q8TDR2 534 aa16.45■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF670-ZNF695F2Z2N8 137 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ATF6P18850 670 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MMP8P22894 467 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 STOMP27105 288 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 AIF1P55008 147 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 CHRNA6Q15825 494 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MBLAC2Q68D91 279 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ZER1Q7Z7L7 766 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 GKN2Q86XP6 184 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 FAM160A2Q8N612 972 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 SYN3O14994 580 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 PTPN6P29350 595 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 PRKD1Q15139 912 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 CDNFQ49AH0 187 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 PNPLA2Q96AD5 504 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 BBIP1A8MTZ0 92 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 CLDN7O95471 211 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 PDYNP01213 254 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 HLA-DQB2P05538 268 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 GDF5P43026 501 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 NR1H2P55055 460 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC25A51Q9H1U9 297 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MAGEE1Q9HCI5 957 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ZCCHC3Q9NUD5 404 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF14P17017 642 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 RBMS1P29558 406 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 NDUFA6P56556 154 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 WWTR1Q9GZV5 400 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF442Q9H7R0 627 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MAGED1Q9Y5V3 778 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 FAM171A2A8MVW0 826 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 AGPSO00116 658 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 AARDQ4LEZ3 155 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 TOMM5Q8N4H5 51 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MSANTD3Q96H12 275 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 MYRFLQ96LU7 910 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 AASSQ9UDR5 926 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 ATRNL1Q5VV63 1379 aa16.44■□□□□ 0.22
CACNA1A-253ENST00000637927 B4GAT1O43505 415 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 MAS1P04201 325 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 SFTPDP35247 375 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 GALNT1Q10472 559 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TIGD4Q8IY51 512 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 SRA1Q9HD15 236 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF358Q9NW07 568 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PCDHGA10Q9Y5H3 936 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PLK4O00444 970 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PLSCR1O15162 318 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ENGP17813 658 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ASPAP45381 313 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 STT3AP46977 705 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 SIRPB2Q5JXA9 342 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 CDHR3Q6ZTQ4 885 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PCDHAC1Q9H158 963 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PRPF19Q9UMS4 504 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 MYH10P35580 1976 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TCRBV7S3A2A0A539 114 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 NEMP2A6NFY4 417 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ASLP04424 464 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TNFRSF8P28908 595 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PMS2P3Q13401 168 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 DPYSL2Q16555 572 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 LYSMD3Q7Z3D4 306 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 HOMEZQ8IX15 550 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 ANKK1Q8NFD2 765 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PTERQ96BW5 349 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 LRFN5Q96NI6 719 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TDP1Q9NUW8 608 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TACSTD2P09758 323 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 TPSB2P20231 275 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC2A5P22732 501 aa16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 MRPL49Q13405 166 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-253ENST00000637927 PTPRCAPQ14761 206 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms