RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SH2B3Q9UQQ2 575 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 DYRK1BQ9Y463 629 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 MMACHCQ9Y4U1 282 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 KCNE2Q9Y6J6 123 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 ZFHX3Q15911 3703 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 TCRBV16S1A1N1A0A5B0 115 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 B4GALT2O60909 372 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SERPINA6P08185 405 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 GSTM2P28161 218 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 GABRB3P28472 473 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 CDKN2DP55273 166 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 KRTAP10-9P60411 292 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 PPP1R7Q15435 360 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 RNASEH2BQ5TBB1 312 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 FAM45BPQ6NSW5 357 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 MBOAT1Q6ZNC8 495 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 NCCRP1Q6ZVX7 275 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 DOLPP1Q86YN1 238 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SHISA5Q8N114 240 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 C7orf57Q8NEG2 295 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 TTLQ8NG68 377 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 OR5T3Q8NGG3 340 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 UTP15Q8TED0 518 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 SLC6A16Q9GZN6 736 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 PPP2R2CQ9Y2T4 447 aa16.69■□□□□ 0.26
SHKBP1-227ENST00000602011 ZNF860A6NHJ4 632 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CES2O00748 559 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 H2AFYO75367 372 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 SERPIND1P05546 499 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 TPP2P29144 1249 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 HNMTP50135 292 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CLCN2P51788 898 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CDKL1Q00532 357 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 PAOXQ6QHF9 649 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 NKAPQ8N5F7 415 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 AGAP11Q8TF27 550 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CA5BP1Q8WTZ4 195 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 NEIL2Q969S2 332 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 PYCR2Q96C36 320 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 LRRC39Q96DD0 335 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CERS2Q96G23 380 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 MS4A14Q96JA4 679 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 OR4K3Q96R72 315 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 HES7Q9BYE0 225 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 ENKD1Q9H0I2 346 aa16.68■□□□□ 0.26
SHKBP1-227ENST00000602011 A0A088AWK7 358 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 IGKV3D-11A0A0A0MRZ8 115 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 CLDN4O14493 209 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 DNALI1O14645 258 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 FANCGO15287 622 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 ZNHIT1O43257 154 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 MAN1A2O60476 641 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 F7P08709 466 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 ZNF10P21506 573 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 STXBP1P61764 594 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 FRG1Q14331 258 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 TEDDM1Q5T9Z0 273 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 HECTD2Q5U5R9 776 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 NXPE4Q6UWF7 544 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 GPALPP1Q8IXQ4 340 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 PDIK1LQ8N165 341 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 NFAM1Q8NET5 270 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 CHTF18Q8WVB6 975 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 ASB5Q8WWX0 329 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 SLCO2A1Q92959 643 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 DMRTA2Q96SC8 542 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 RBCK1Q9BYM8 510 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 PITHD1Q9GZP4 211 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 PPANQ9NQ55 473 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 PPIEQ9UNP9 301 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 ASB1Q9Y576 335 aa16.67■□□□□ 0.26
SHKBP1-227ENST00000602011 MED13LQ71F56 2210 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 GNAZP19086 355 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 PTGS2P35354 604 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 HSD17B7P56937 341 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 REEP5Q00765 189 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 RCN2Q14257 317 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 CATSPEREQ5SY80 951 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 RBM20Q5T481 1227 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 THOC6Q86W42 341 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 SPNS2Q8IVW8 549 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 CEP97Q8IW35 865 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 TMEM156Q8N614 296 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 ACBD4Q8NC06 268 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 B3GNT7Q8NFL0 401 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 FAM57AQ8TBR7 257 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 FAR2Q96K12 515 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 CCDC77Q9BR77 488 aa16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 TSPAN10Q9H1Z9 355 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-227ENST00000602011 SLC24A3Q9HC58 644 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms