RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 CHID1Q9BWS9 393 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 NPLQ9BXD5 320 aaPredicted RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 ACTRT3Q9BYD9 372 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 LMAN1LQ9HAT1 526 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 SLC22A14Q9Y267 594 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 VSTM2BA6NLU5 285 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 A8MT66 165 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 L7N2F9 121 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TSC22D2O75157 780 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 BANF1O75531 89 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 POLR2CP19387 275 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 VAMP2P63027 116 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ARFRP1Q13795 201 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TNFAIP8L2Q6P589 184 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 USP43Q70EL4 1123 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 GOLGA7Q7Z5G4 137 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 RELL1Q8IUW5 271 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 GOLM1Q8NBJ4 401 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 A0A1W2PP55 124 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 A0A1W2PRQ8 180 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 POLR1CO15160 346 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 HLA-DPB1P04440 258 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ASGR2P07307 311 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ACSL1P33121 698 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 UBE2NP61088 152 aaKnown RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 BDH1Q02338 343 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ALG10Q5BKT4 473 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TPRG1LQ5T0D9 272 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ZNF227Q86WZ6 799 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 SPPL2CQ8IUH8 684 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 MINDY2Q8NBR6 621 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ZDHHC1Q8WTX9 485 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 PRRX2Q99811 253 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 CPEB1Q9BZB8 566 aaKnown RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 EFCAB7A8K855 629 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 AGRPO00253 132 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 RRP8O43159 456 aaKnown RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 CFHP08603 1231 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ANXA3P12429 323 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 HOXA9P31269 272 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 LEPRP48357 1165 aaKnown RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 GALK2Q01415 458 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ABRAXAS2Q15018 415 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 CA9Q16790 459 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 LACTB2Q53H82 288 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 FAM182AQ5T1J6 154 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TLDC1Q6P9B6 456 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ENPP6Q6UWR7 440 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 DENND6BQ8NEG7 585 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 CASD1Q96PB1 797 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 PKP4Q99569 1192 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 LTN1O94822 1766 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TRBC2A0A5B9 178 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 RCCD1A6NED2 376 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 DNAJB6O75190 326 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 GJB5O95377 273 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 CD48P09326 243 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 IDH3AP50213 366 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 DCAF7P61962 342 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 SLC7A9P82251 487 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 PMS2P3Q13401 168 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 ZNF267Q14586 743 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 ATG9BQ674R7 924 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 TMEM225Q6GV28 225 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 OR6K6Q8NGW6 343 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 OR8D2Q9GZM6 311 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 DENND2DQ9H6A0 471 aaPredicted RBP11.55□□□□□ -0.56
NEK9-210ENST00000557026 KLHL21Q9UJP4 597 aa11.55□□□□□ -0.56
NEK9-210ENST00000557026 A0A1B0GVC2 190 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 NADKO95544 446 aaPredicted RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 SLC25A11Q02978 314 aaKnown RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 CLCA4Q14CN2 919 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 LDB1Q86U70 411 aaPredicted RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 TXNDC5Q8NBS9 432 aaKnown RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 SMG8Q8ND04 991 aaKnown RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 CENPOQ9BU64 300 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 BHLHE41Q9C0J9 482 aaPredicted RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 TIMMDC1Q9NPL8 285 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 DNAJC25-GNG10A0A024R161 153 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 OR14I1A6ND48 311 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 J3KR12 359 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 PRAMEF2O60811 474 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 HOXD8P13378 290 aaPredicted RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 ZNF12P17014 697 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 ENGP17813 658 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 HTR3AP46098 478 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 TGFBR3Q03167 851 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 DLX2Q07687 328 aaPredicted RBP11.54□□□□□ -0.56
NEK9-210ENST00000557026 CLEC6AQ6EIG7 209 aa11.54□□□□□ -0.56
NEK9-210ENST00000557026 AMIGO2Q86SJ2 522 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms