RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 FBXO36Q8NEA4 188 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 PLPP5Q8NEB5 264 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 NT5CQ8TCD5 201 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ANKRD49Q8WVL7 239 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 SLC5A11Q8WWX8 675 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ATL1Q8WXF7 558 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 MCMBPQ9BTE3 642 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 TRIM54Q9BYV2 358 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ENKD1Q9H0I2 346 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 C19orf25Q9UFG5 118 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 SAR1BQ9Y6B6 198 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 FAM95CA0A1B0GW59 222 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 MAGEB17A8MXT2 336 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 C4orf51C9J302 202 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 E7ESA3 106 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 FAM227AF5H4B4 570 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 CHST10O43529 356 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 NADKO95544 446 aaPredicted RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 SERPIND1P05546 499 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ZNF888P0CJ79 500 aaPredicted RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ALOX12P18054 663 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 REEP5Q00765 189 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 CSHL1Q14406 222 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ABRAXAS2Q15018 415 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 HERC3Q15034 1050 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 NSDHLQ15738 373 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 C18orf21Q32NC0 220 aaPredicted RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ZNF766Q5HY98 468 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ACER2Q5QJU3 275 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 PAPD4Q6PIY7 484 aaKnown RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 MEX3BQ6ZN04 569 aaKnown RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 THOC6Q86W42 341 aaKnown RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 BEST3Q8N1M1 668 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ACBD4Q8NC06 268 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 M1APQ8TC57 530 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 UTP15Q8TED0 518 aaKnown RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 GPR137Q96N19 417 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 RUNDC3BQ96NL0 473 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 OR1F2PQ96R84 312 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 NAPGQ99747 312 aaPredicted RBP11.13□□□□□ -0.63
GABPB1-206ENST00000543881 AICDAQ9GZX7 198 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 SMYD2Q9NRG4 433 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 ZFP69BQ9UJL9 534 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 PYCARDQ9ULZ3 195 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 SLC22A14Q9Y267 594 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 SNX24Q9Y343 169 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 GTF3C1Q12789 2109 aa11.13□□□□□ -0.63
GABPB1-206ENST00000543881 PABPN1LA6NDY0 278 aaKnown RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CCDC188H7C350 402 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 MLYCDO95822 493 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 FHP07954 510 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 SMIM10L1P0DMW3 83 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 IL10P22301 178 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 AHRP35869 848 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 HNF4AP41235 474 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ART1P52961 327 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CBLBQ13191 982 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TUBA3CQ13748 450 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 NXPE4Q6UWF7 544 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TBC1D20Q96BZ9 403 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 SMIM10Q96HG1 83 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 SIGLEC12Q96PQ1 595 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 KRT12Q99456 494 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TREX2Q9BQ50 279 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 HES7Q9BYE0 225 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TSPAN10Q9H1Z9 355 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 KLHL31Q9H511 634 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 KCNK13Q9HB14 408 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 MMP25Q9NPA2 562 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ANKRD10Q9NXR5 420 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CXorf49A8MYA2 514 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 WISP3O95389 354 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CD96P40200 585 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 GDF5P43026 501 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 OR4D2P58180 307 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 SLC26A5P58743 744 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 RAB8AP61006 207 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 BTG2P78543 158 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CDKL1Q00532 357 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ALDH6A1Q02252 535 aaKnown RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 RGS1Q08116 209 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TSNQ15631 228 aaKnown RBP11.12□□□□□ -0.63
GABPB1-206ENST00000543881 EXT1Q16394 746 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CAPN12Q6ZSI9 719 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 TMPRSS11BQ86T26 416 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 KIF2BQ8N4N8 673 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 NKAPQ8N5F7 415 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms