RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PDE9AO76083 593 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 LAMP1P11279 417 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 CBLP22681 906 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 AQP1P29972 269 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 LIMS1P48059 325 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 TARDBPQ13148 414 aaKnown RBP eCLIP16.91■□□□□ 0.3
RAB40C-205ENST00000539661 QPRTQ15274 297 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 RNLSQ5VYX0 342 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 CAMKMTQ7Z624 323 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ELMOD2Q8IZ81 293 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 CLDN22Q8N7P3 220 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 OR52J3Q8NH60 311 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 REPS1Q96D71 796 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 MKRN2Q9H000 416 aaKnown RBP16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ABCG8Q9H221 673 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 NDUFB11Q9NX14 153 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 SSR3Q9UNL2 185 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF106Q9H2Y7 1883 aaKnown RBP16.91■□□□□ 0.3
RAB40C-205ENST00000539661 A0A0G2JMP0 313 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 OR6C70A6NIJ9 312 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 H3BM21 787 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SCAMP2O15127 329 aaKnown RBP16.9■□□□□ 0.3
RAB40C-205ENST00000539661 YY2O15391 372 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 IL1AP01583 271 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CSF3P09919 207 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 JUPP14923 745 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 OR3A3P47888 321 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 GZMKP49863 264 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CD83Q01151 205 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 EFR3AQ14156 821 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SPHARQ15513 63 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 WDR45BQ5MNZ6 344 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 PDZK1Q5T2W1 519 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CCDC28AQ8IWP9 274 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 OR9Q1Q8NGQ5 310 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 MAL2Q969L2 176 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SLC25A46Q96AG3 418 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 DHRS9Q9BPW9 319 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 TOR4AQ9NXH8 423 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF282Q9UDV7 671 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CRLS1Q9UJA2 301 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 OGDHLQ9ULD0 1010 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 VPS4AQ9UN37 437 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 LOC105371267A0A1B0GV96 52 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 TMEM189-UBE2V1I3L0A0 370 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 M0R129 80 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 RPLP2P05387 115 aaKnown RBP16.9■□□□□ 0.3
RAB40C-205ENST00000539661 AOAHP28039 575 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CRISP1P54107 249 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 NKX3-2P78367 333 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 ARF5P84085 180 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 RBBP4Q09028 425 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SMARCB1Q12824 385 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 NCF4Q15080 339 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 ARMC12Q5T9G4 340 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 HSDL2Q6YN16 418 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 TTC9BQ8N6N2 239 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 OR9Q2Q8NGE9 314 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 VANGL1Q8TAA9 524 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SPATA17Q96L03 361 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 FAM129BQ96TA1 746 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 PIP5K1AQ99755 562 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 MND1Q9BWT6 205 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SLC12A9Q9BXP2 914 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 FAM83DQ9H4H8 585 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 IL26Q9NPH9 171 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 WDR70Q9NW82 654 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 GABRQQ9UN88 632 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 SCN8AQ9UQD0 1980 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 TRPM7Q96QT4 1865 aa16.9■□□□□ 0.3
RAB40C-205ENST00000539661 CD160O95971 181 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 TRBC1P01850 177 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 C1QBP02746 253 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 C8GP07360 202 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ATF6P18850 670 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 CD52P31358 61 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 IFNA8P32881 189 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ASMTP46597 345 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 SNRPGP62308 76 aaKnown RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 CAP1Q01518 475 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 DOC2BQ14184 412 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ARMCX6Q7L4S7 300 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 NPAS3Q8IXF0 933 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 NAGSQ8N159 534 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ATAD1Q8NBU5 361 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 KLHL6Q8WZ60 621 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 MYO19Q96H55 970 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 VPS29Q9UBQ0 182 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 GPSM3Q9Y4H4 160 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 A0A0B4J293 547 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 A0A1B0GVM2 712 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 FABP12A6NFH5 140 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 CPNE3O75131 537 aaKnown RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 CSO75390 466 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms