RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ATG10Q9H0Y0 220 aa13.2□□□□□ -0.3
CCND1-204ENST00000539241 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
CCND1-204ENST00000539241 ANKHQ9HCJ1 492 aa13.2□□□□□ -0.3
CCND1-204ENST00000539241 SNX15Q9NRS6 342 aa13.2□□□□□ -0.3
CCND1-204ENST00000539241 STMN3Q9NZ72 180 aa13.2□□□□□ -0.3
CCND1-204ENST00000539241 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 HEATR5BQ9P2D3 2071 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 CROCCQ5TZA2 2017 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 ENO4A6NNW6 628 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 A8MUI8 341 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 SLC16A5O15375 505 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 HNRNPRO43390 633 aaKnown RBP13.19□□□□□ -0.3
CCND1-204ENST00000539241 LCMT2O60294 686 aaKnown RBP13.19□□□□□ -0.3
CCND1-204ENST00000539241 CDH16O75309 829 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 SLC35E2BP0CK96 405 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 CDH1P12830 882 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 MST1P26927 711 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 TYK2P29597 1187 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 GRK3P35626 688 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 MAGEA12P43365 314 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 AGTR2P50052 363 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 IFFO1Q0D2I5 559 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 BEND6Q5SZJ8 279 aaPredicted RBP13.19□□□□□ -0.3
CCND1-204ENST00000539241 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 RAPH1Q70E73 1250 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 ASPGQ86U10 573 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 RIBC1Q8N443 379 aaPredicted RBP13.19□□□□□ -0.3
CCND1-204ENST00000539241 DNAJB8Q8NHS0 232 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 SLC13A3Q8WWT9 602 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 ANKRD7Q92527 254 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 TM4SF19Q96DZ7 209 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 SGPP1Q9BX95 441 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 DERL2Q9GZP9 239 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 COPG2Q9UBF2 871 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
CCND1-204ENST00000539241 LRBAP50851 2863 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 TEP1Q99973 2627 aaKnown RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 A0A087X1B8 175 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 TRGV8A0A0C4DH27 118 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ARHGAP10A1A4S6 786 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 PRSS44E7EML9 344 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 RDH16O75452 317 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 UNC5CO95185 931 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 C2P06681 752 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 SLC35G6P0C7Q6 338 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 CCND1P24385 295 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 SLCO1A2P46721 670 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 SRSF11Q05519 484 aaKnown RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 PHKG1Q16816 387 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ZNF766Q5HY98 468 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 FCRLBQ6BAA4 426 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 SP5Q6BEB4 398 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 CAPN13Q6MZZ7 669 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 TIFABQ6ZNK6 161 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 PDSS2Q86YH6 399 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 MFSD9Q8NBP5 474 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 KCT2Q8NC54 265 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 OR2W6PQ8NHA6 318 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 EPS8L3Q8TE67 593 aaKnown RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 ANKRD49Q8WVL7 239 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 UBXN10Q96LJ8 280 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ZNF354BQ96LW1 612 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 SUCOQ9UBS9 1254 aaKnown RBP13.18□□□□□ -0.3
CCND1-204ENST00000539241 CTNNAL1Q9UBT7 734 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 ACOT9Q9Y305 439 aa13.18□□□□□ -0.3
CCND1-204ENST00000539241 A0A096LPK6 155 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 ZNF860A6NHJ4 632 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 CDC123O75794 336 aaPredicted RBP13.17□□□□□ -0.3
CCND1-204ENST00000539241 HIST1H2AGP0C0S8 130 aaPredicted RBP13.17□□□□□ -0.3
CCND1-204ENST00000539241 CCDC166P0CW27 439 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 HIST1H2ADP20671 130 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 ATP6V0D1P61421 351 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 PMP22Q01453 160 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 CSHL1Q14406 222 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 EXT1Q16394 746 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 ACER2Q5QJU3 275 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
CCND1-204ENST00000539241 ADAMTSL2Q86TH1 951 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 M1APQ8TC57 530 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 MZB1Q8WU39 189 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 PEX11GQ96HA9 241 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 HIST1H2AHQ96KK5 128 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 HIST1H2AJQ99878 128 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
CCND1-204ENST00000539241 H2AFJQ9BTM1 129 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms