RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ZNF597Q96LX8 424 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 SLC29A1Q99808 456 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 RAB11FIP5Q9BXF6 653 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 PELI2Q9HAT8 420 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 MAPRE3Q9UPY8 281 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 ICKQ9UPZ9 632 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 BTBD3Q9Y2F9 522 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 FRYLO94915 3013 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 KIR2DS5A0A0G2JLQ3 304 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 A0A0G2JNG1 304 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 A0A1W2PPV9 198 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 ELOVL7A1L3X0 281 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 KIR2DS3K7RE56 304 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 TXNDC9O14530 226 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 AQP9O43315 295 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 TPST1O60507 370 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 LAMP1P11279 417 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 PIM1P11309 404 aaPredicted RBP21.63■■□□□ 1.05
CDX1-201ENST00000231656 PKLRP30613 574 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 BNC1Q01954 994 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 KIR2DS5Q14953 304 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 HKDC1Q2TB90 917 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 TMIGD1Q6UXZ0 262 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 COMMD6Q7Z4G1 85 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 C17orf64Q86WR6 236 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 GKN2Q86XP6 184 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 MICU2Q8IYU8 434 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 MARVELD2Q8N4S9 558 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 SLC37A2Q8TED4 501 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 ZDHHC1Q8WTX9 485 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 SMPDL3AQ92484 453 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 CIB1Q99828 191 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 ACAT2Q9BWD1 397 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 PRM3Q9NNZ6 103 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 CPNE7Q9UBL6 633 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 TAC3Q9UHF0 121 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 AP4B1Q9Y6B7 739 aa21.63■■□□□ 1.05
CDX1-201ENST00000231656 C7orf72A4D263 438 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 YY2O15391 372 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 KDM1AO60341 852 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 TGFB1P01137 390 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 CKMT2P17540 419 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 UBE2IP63279 158 aaKnown RBP21.62■■□□□ 1.05
CDX1-201ENST00000231656 SIM2Q14190 667 aaPredicted RBP21.62■■□□□ 1.05
CDX1-201ENST00000231656 PEAR1Q5VY43 1037 aaPredicted RBP21.62■■□□□ 1.05
CDX1-201ENST00000231656 ANKRD26P1Q6NSI1 321 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 TRIM48Q8IWZ4 208 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 OR52E4Q8NGH9 312 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 OR2L8Q8NGY9 312 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDX1-201ENST00000231656 CENPNQ96H22 339 aaPredicted RBP21.62■■□□□ 1.05
CDX1-201ENST00000231656 TBCDQ9BTW9 1192 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 PCBD2Q9H0N5 130 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 OR51B5Q9H339 312 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 Q9H521 79 aa21.62■■□□□ 1.05
CDX1-201ENST00000231656 EXO1Q9UQ84 846 aaKnown RBP21.62■■□□□ 1.05
CDX1-201ENST00000231656 FAM149AA5PLN7 773 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 A6NHS1 94 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 GABRR3A8MPY1 467 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 GSTA4O15217 222 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 SDC3O75056 442 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 SMNDC1O75940 238 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDX1-201ENST00000231656 KLHL18O94889 574 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 VIPP01282 170 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 HPCAL1P37235 193 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 CCT8P50990 548 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 PDK3Q15120 406 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 NRF1Q16656 503 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 PPP4R4Q6NUP7 873 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 EPHX4Q8IUS5 362 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 KRT78Q8N1N4 520 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 METTL4Q8N3J2 472 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 WDR48Q8TAF3 677 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 FIG4Q92562 907 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 COQ8BQ96D53 544 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 DUSP26Q9BV47 211 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 C11orf16Q9NQ32 467 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 POT1Q9NUX5 634 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 DOLKQ9UPQ8 538 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 ERVK-11Q9UQG0 969 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 PCDHGA2Q9Y5H1 932 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 GNG14A0A1W2PPG7 69 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 B4DGG1 531 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 LMO7DNF2Z398 122 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 GMNNO75496 209 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 PIAS2O75928 621 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 SCELO95171 688 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 PHEXP78562 749 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 ABHD18Q0P651 414 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 ATP6AP1Q15904 470 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 INTS11Q5TA45 600 aaKnown RBP21.61■■□□□ 1.05
CDX1-201ENST00000231656 CPTPQ5TA50 214 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 ZNF551Q7Z340 670 aaPredicted RBP21.61■■□□□ 1.05
CDX1-201ENST00000231656 SDR16C5Q8N3Y7 309 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 ABHD11Q8NFV4 315 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 LCN9Q8WX39 176 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 JPH3Q8WXH2 748 aaPredicted RBP21.61■■□□□ 1.05
CDX1-201ENST00000231656 SH3KBP1Q96B97 665 aa21.61■■□□□ 1.05
CDX1-201ENST00000231656 FAM120BQ96EK7 910 aaKnown RBP21.61■■□□□ 1.05
CDX1-201ENST00000231656 PANX1Q96RD7 426 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms