RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KHDRBS3O75525 346 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 PGRP06401 933 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 GP1BBP13224 206 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 GNALP38405 381 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 HERC3Q15034 1050 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 PNCKQ6P2M8 343 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ZCCHC7Q8N3Z6 543 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 LNX2Q8N448 690 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ARFGAP1Q8N6T3 406 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 FAM227AF5H4B4 570 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 IL33O95760 270 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 CTGFP29279 349 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 CDK6Q00534 326 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 MPP7Q5T2T1 576 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 CBR4Q8N4T8 237 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 TAS2R9Q9NYW1 312 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 PTGDR2Q9Y5Y4 395 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 RFPL1O75677 317 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 GABRA3P34903 492 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 EMX2Q04743 252 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 KRTCAP2Q8N6L1 136 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 OR10Q1Q8NGQ4 319 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 RAB8BQ92930 207 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 SMIM14Q96QK8 99 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF382Q96SR6 550 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 GORASP1Q9BQQ3 440 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 TRBC2A0A5B9 178 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 PSMD9O00233 223 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 KIAA0895LQ68EN5 471 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 UNC5DQ6UXZ4 953 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 GPR149Q86SP6 731 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 OR10H4Q8NGA5 316 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 DEFB126Q9BYW3 111 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 SLC6A17Q9H1V8 727 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 PAK6Q9NQU5 681 aaPredicted RBP16.71■□□□□ 0.27
PTPN21-208ENST00000556564 HOXD8P13378 290 aaPredicted RBP16.71■□□□□ 0.27
PTPN21-208ENST00000556564 DOC2AQ14183 400 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 TRAF7Q6Q0C0 670 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 CHID1Q9BWS9 393 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.71■□□□□ 0.27
PTPN21-208ENST00000556564 RMI1Q9H9A7 625 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 MS4A12Q9NXJ0 267 aa16.71■□□□□ 0.27
PTPN21-208ENST00000556564 KLHL33A6NCF5 533 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 SLC35E2BP0CK96 405 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 GSTM4Q03013 218 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 NOXRED1Q6NXP6 359 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 C1GALT1C1Q96EU7 318 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 TBX5Q99593 518 aa16.71■□□□□ 0.26
PTPN21-208ENST00000556564 SCO2O43819 266 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CER1O95813 267 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 RPS9P46781 194 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PDSS1Q5T2R2 415 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 LCN1P1Q5VSP4 162 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 OR4C11Q6IEV9 310 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 FAM120CQ9NX05 1096 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PRSS38A1L453 326 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 RTCAO00442 366 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CDC40O60508 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 RAP2AP10114 183 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PER3P56645 1201 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ELOAQ14241 798 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CDKN3Q16667 212 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 TMEM107Q6UX40 140 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 LIPIQ6XZB0 460 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 TMEM135Q86UB9 458 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 DTD2Q96FN9 168 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 TMEM74Q96NL1 305 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 FBRSL1Q9HCM7 1045 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 FARSBQ9NSD9 589 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 DAPK2Q9UIK4 370 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 WASH4PA8MWX3 477 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ASNA1O43681 348 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ALDOAP04075 364 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 RAB28P51157 221 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 POU6F2P78424 691 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 SNTA1Q13424 505 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PDCD4Q53EL6 469 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ARHGAP12Q8IWW6 846 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 SVOPLQ8N434 492 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ENKURQ8TC29 256 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CENPNQ96H22 339 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CLK4Q9HAZ1 481 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 DOCK1Q14185 1865 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 MYO5AQ9Y4I1 1855 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PUM1Q14671 1186 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 FAM69BQ5VUD6 431 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 OR8K5Q8NH50 307 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CADM1Q9BY67 442 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 UBE2ZQ9H832 354 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 MARCH7Q9H992 704 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PREBQ9HCU5 417 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 XIRP1Q702N8 1843 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms