RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 OR5T3Q8NGG3 340 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 OR51Q1Q8NH59 317 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 UTP15Q8TED0 518 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CREB3L4Q8TEY5 395 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 UBLCP1Q8WVY7 318 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 NACC2Q96BF6 587 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 PTCD3Q96EY7 689 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 EFCAB11Q9BUY7 163 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 NUDT9Q9BW91 350 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 TGIF2Q9GZN2 237 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 EHD1Q9H4M9 534 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 KLHL31Q9H511 634 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ANKZF1Q9H8Y5 726 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 PSMC3IPQ9P2W1 217 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ANGPTL3Q9Y5C1 460 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 PCDHGA9Q9Y5G4 932 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 URADA6NGE7 173 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ANKDD1BA6NHY2 528 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 LRRC14BA6NHZ5 514 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ESPNB1AK53 854 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 C4orf51C9J302 202 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 CDC123O75794 336 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 BMP10O95393 424 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 SERPINA6P08185 405 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ITGA3P26006 1051 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 GSTM2P28161 218 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 EFNA3P52797 238 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 SKP1P63208 163 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 HYAL2Q12891 473 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 AIMP2Q13155 320 aaKnown RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 NAA30Q147X3 362 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 PAGE2BQ5JRK9 111 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 LGSNQ5TDP6 509 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 MYLK4Q86YV6 388 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 GALNT16Q8N428 558 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 TEX9Q8N6V9 391 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 PTGR2Q8N8N7 351 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 MTBPQ96DY7 904 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 WDR34Q96EX3 536 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 PEX11GQ96HA9 241 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 VPS50Q96JG6 964 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 VN1R1Q9GZP7 353 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF160Q9HCG1 818 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 COPG2Q9UBF2 871 aa11.18□□□□□ -0.62
RAB5C-204ENST00000547517 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
RAB5C-204ENST00000547517 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 MED13Q9UHV7 2174 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 A0A0G2JN53 185 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 IQANK1A0A1B0GTG1 560 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 SMIM23A6NLE4 172 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 ERI3O43414 337 aaKnown RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 KLK8O60259 260 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 DNAJB6O75190 326 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 SMIM24O75264 130 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 CLEC3AO75596 197 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 SIX3O95343 332 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 HPP00738 406 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 SHBGP04278 402 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 RBP1P09455 135 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 C8orf89P0DMQ9 161 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 PCNAP12004 261 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 COX6A1P12074 109 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 COL6A2P12110 1019 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 EPB42P16452 691 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 HNRNPH1P31943 449 aaKnown RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 VSNL1P62760 191 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 KLRB1Q12918 225 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 LAPTM5Q13571 262 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 TBCCQ15814 346 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 HIST2H2ACQ16777 129 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 VWA5B1Q5TIE3 1220 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 HIST2H2AA3Q6FI13 130 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 NIPAL1Q6NVV3 410 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 GOLGA7Q7Z5G4 137 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 VN1R5Q7Z5H4 357 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 TEX19Q8NA77 164 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 GAL3ST3Q96A11 431 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 PHF21BQ96EK2 531 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 TRIM4Q9C037 500 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 PITHD1Q9GZP4 211 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 NT5DC2Q9H857 520 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 MLXIPLQ9NP71 852 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 FETUBQ9UGM5 382 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 TBK1Q9UHD2 729 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF451Q9Y4E5 1061 aa11.17□□□□□ -0.62
RAB5C-204ENST00000547517 V9GYY5 206 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-204ENST00000547517 SPTA1P02549 2419 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms