RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FRG2BQ96QU4 278 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 WACQ9BTA9 647 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 SEC61A2Q9H9S3 476 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 SLC28A3Q9HAS3 691 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
COL4A6-208ENST00000538570 ENY2Q9NPA8 101 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 C2orf92A0A1B0GVN3 265 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-208ENST00000538570 NDUFS4O43181 175 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 CBSLP0DN79 551 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 CBSP35520 551 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 PKP2Q99959 881 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 SLC29A3Q9BZD2 475 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 KCNN3Q9UGI6 736 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 NOX1Q9Y5S8 564 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 OR51F1A6NGY5 319 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 VILLO15195 856 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 HSPA12AO43301 675 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 XPNPEP2O43895 674 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 OAZ2O95190 189 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 HCKP08631 526 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 GLP1RP43220 463 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 DEFB115Q30KQ5 88 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 P4HA3Q7Z4N8 544 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.86
COL4A6-208ENST00000538570 KLK6Q92876 244 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 PNPLA2Q96AD5 504 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 CREB3L1Q96BA8 519 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-208ENST00000538570 CCM2Q9BSQ5 444 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 SLA2Q9H6Q3 261 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 FAIMQ9NVQ4 179 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 UTS2RQ9UKP6 389 aa9.65□□□□□ -0.86
COL4A6-208ENST00000538570 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 NEMP2A6NFY4 417 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 YJEFN3A6XGL0 299 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF705EA8MWA4 302 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM63AO94886 807 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 IFNA10P01566 189 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 IFNA4P05014 189 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 HLA-DQB2P05538 268 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 NUDT6P53370 316 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 CDK6Q00534 326 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 E2F1Q01094 437 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 RIPPLY1Q0D2K3 151 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 FUT2Q10981 343 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 PON3Q15166 354 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 UGT8Q16880 541 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 MPP7Q5T2T1 576 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 TMCO2Q7Z6W1 182 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 PYCR2Q96C36 320 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 TUBB1Q9H4B7 451 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 WDR26Q9H7D7 661 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ACTR10Q9NZ32 417 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 COPZ2Q9P299 210 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 MRPS17Q9Y2R5 130 aaKnown RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 PRSS44E7EML9 344 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ADAMTS3O15072 1205 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 CSF2P04141 144 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 HTR1AP08908 422 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 UNGP13051 313 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 RABGGTBP53611 331 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF181Q2M3W8 571 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 GDPD4Q6W3E5 623 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 SLC36A4Q6YBV0 504 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 MOB2Q70IA6 237 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 CAMKVQ8NCB2 501 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ITPKCQ96DU7 683 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 LIN37Q96GY3 246 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 BEX2Q9BXY8 128 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 SUV39H2Q9H5I1 410 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 RANBP3Q9H6Z4 567 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ACTR3BQ9P1U1 418 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 SLC17A6Q9P2U8 582 aa9.65□□□□□ -0.87
COL4A6-208ENST00000538570 ERI3O43414 337 aaKnown RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 FPR1P21462 350 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TM4SF1P30408 202 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 EVI2BP34910 448 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CDKN1CP49918 316 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 NOGQ13253 232 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 FAM110CQ1W6H9 321 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 KCTD9Q7L273 389 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 PLA2G15Q8NCC3 412 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SUN3Q8TAQ9 357 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CLEC4CQ8WTT0 213 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 NR4A3Q92570 626 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 AURKBQ96GD4 344 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CD180Q99467 661 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TGIF2Q9GZN2 237 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SACM1LQ9NTJ5 587 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 RNF6Q9Y252 685 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 A8MUA0 341 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CDC7O00311 574 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SMAD9O15198 467 aaKnown RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SIX3O95343 332 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 EOMESO95936 686 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 MBP02144 154 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF8P17098 575 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CDH11P55287 796 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms