RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PRMT7Q9NVM4 692 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 RCC2Q9P258 522 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CPSF3Q9UKF6 684 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ADAM28Q9UKQ2 775 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ITGA11Q9UKX5 1188 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 PCDHA12Q9UN75 941 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NUP210Q8TEM1 1887 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 A0A1B0GVT2 93 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF814B7Z6K7 855 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLIC2O15247 247 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 SPRY1O43609 319 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZIC3O60481 467 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF217O75362 1048 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CSDE1O75534 798 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 KLF8O95600 359 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 MT-ND3P03897 115 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 RAB40ALP0C0E4 278 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR52Z1P0C646 297 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 G6PDP11413 515 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 PROZP22891 400 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 DNASE1P24855 282 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CASP3P42574 277 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ACADVLP49748 655 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARPP19P56211 112 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 TAS2R38P59533 333 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ASIC1P78348 528 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 LTBQ06643 244 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 AP1B1Q10567 949 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 GPR18Q14330 331 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 FAM174BQ3ZCQ3 159 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 DNTTIP2Q5QJE6 756 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 MANEAQ5SRI9 462 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 TEX38Q6PEX7 206 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 B3GNT6Q6ZMB0 384 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 DBX2Q6ZNG2 339 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ADGRG3Q86Y34 549 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 GPSM1Q86YR5 675 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CNGA4Q8IV77 575 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLYBLQ8N0X4 340 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 BEST3Q8N1M1 668 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 RASGEF1CQ8N431 466 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC5A8Q8N695 610 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 PCDH20Q8N6Y1 951 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 GPT2Q8TD30 523 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 UTP15Q8TED0 518 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 MOB3AQ96BX8 217 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 MTERF3Q96E29 417 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 QRFPRQ96P65 431 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR6C1Q96RD1 312 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ISCUQ9H1K1 167 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 FN3KQ9H479 309 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 MRPL44Q9H9J2 332 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLK4Q9HAZ1 481 aaKnown RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 HHATLQ9HCP6 504 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ASCL3Q9NQ33 180 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 NRIP3Q9NQ35 241 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 TUBA8Q9NY65 449 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 COQ3Q9NZJ6 369 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ODF2LQ9ULJ1 636 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ENTPD4Q9Y227 616 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 LOXL2Q9Y4K0 774 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 PLIN4Q96Q06 1357 aa4.48□□□□□ -1.69
HMGB1P23-201ENST00000518743 ABCA4P78363 2273 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 IGHV1OR15-9A0A0B4J2B8 117 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 A4D1N5 150 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKUB1A6NFN9 424 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 FAM90A26D6RGX4 464 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 E5RJQ4 531 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD28O15084 1053 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 PGRMC2O15173 223 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 HSPA12AO43301 675 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 LDB2O43679 373 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZBTB14O43829 449 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC22A3O75751 556 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SOX30O94993 753 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 CYP1A2P05177 515 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SNRNP70P08621 437 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 FGF2P09038 288 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR2T7P0C7T2 308 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 HRH2P25021 359 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 PIGAP37287 484 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 APOBEC1P41238 236 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 CSNK1EP49674 416 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 DPTQ07507 201 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TRAF2Q12933 501 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 MTX1Q13505 466 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 RCN2Q14257 317 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 EIF2S3LQ2VIR3 472 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 STXBP5Q5T5C0 1151 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 HIST2H2BDQ6DRA6 164 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ALKBH5Q6P6C2 394 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 BRAT1Q6PJG6 821 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 CNSTQ6PJW8 725 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms