RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 NMRAL1Q9HBL8 299 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 DNAJC11Q9NVH1 559 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 B3GNT3Q9Y2A9 372 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 ASB1Q9Y576 335 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CSAG2Q9Y5P2 127 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PRRC2CQ9Y520 2896 aaKnown RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 FLNCQ14315 2725 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 RP1L1Q8IWN7 2480 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CPAMD8Q8IZJ3 1885 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 IGHV3-20A0A0C4DH32 117 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 HAX1O00165 279 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CHST10O43529 356 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 H2AFYO75367 372 aaKnown RBP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CDC123O75794 336 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 ACSL3O95573 720 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 C2P06681 752 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SERPINA6P08185 405 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 RAB8AP61006 207 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 TMIGD1Q6UXZ0 262 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 LINC00696Q6ZRV3 163 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 Q6ZS92 163 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CEP128Q6ZU80 1094 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 ABHD13Q7L211 337 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CENPLQ8N0S6 344 aaPredicted RBP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SNX31Q8N9S9 440 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
HDAC1-209ENST00000484305 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 ATOH8Q96SQ7 321 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 FMO2Q99518 471 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 FUT8Q9BYC5 575 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 RBCK1Q9BYM8 510 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 LANCL2Q9NS86 450 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 RIC8BQ9NVN3 520 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 GPRC5BQ9NZH0 403 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 ACOT9Q9Y305 439 aa12.17□□□□□ -0.46
HDAC1-209ENST00000484305 SUPT3HB4E1H0 165 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 UBXN8O00124 270 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CLGNO14967 610 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CCNT2O60583 730 aaKnown RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 KERAO60938 352 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 SUPT3HO75486 399 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 S100BP04271 92 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 SERPINA7P05543 415 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 FHP07954 510 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CYC1P08574 325 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 SMIM10L1P0DMW3 83 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ITGAMP11215 1152 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 EPORP19235 508 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 AGTR2P50052 363 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 RHAGQ02094 409 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 PDK4Q16654 411 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 XKR6Q5GH73 641 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 TOR1AIP1Q5JTV8 583 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ISLR2Q6UXK2 745 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CPEB2Q7Z5Q1 589 aaKnown RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ANKRD37Q7Z713 158 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CUZD1Q86UP6 607 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 KRT78Q8N1N4 520 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 SIRT6Q8N6T7 355 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 C19orf60Q96EN9 201 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 SMIM10Q96HG1 83 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 IMMP1LQ96LU5 166 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 OR1F2PQ96R84 312 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 WDR77Q9BQA1 342 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 TUBB6Q9BUF5 446 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 NT5DC2Q9H857 520 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 NUDT4Q9NZJ9 180 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 PTGFRNQ9P2B2 879 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 COPG2Q9UBF2 871 aa12.16□□□□□ -0.46
HDAC1-209ENST00000484305 ZNF490Q9ULM2 529 aaPredicted RBP12.16□□□□□ -0.46
HDAC1-209ENST00000484305 A0A087X1B8 175 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 URADA6NGE7 173 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 VPS4BO75351 444 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 SEC24DO94855 1032 aaPredicted RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 TBX6O95947 436 aaPredicted RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 MTHFD2P13995 350 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 CD22P20273 847 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 IL10P22301 178 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 TYK2P29597 1187 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 HNRNPH1P31943 449 aaKnown RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 SOX11P35716 441 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 GLRBP48167 497 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 SKP1P63208 163 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 MFAP5Q13361 173 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 DOC2AQ14183 400 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms