RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 EFCAB11Q9BUY7 163 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 NUDT9Q9BW91 350 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 PITHD1Q9GZP4 211 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 ATP13A2Q9NQ11 1180 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 COPG2Q9UBF2 871 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 XPR1Q9UBH6 696 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 FETUBQ9UGM5 382 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 MKL2Q9ULH7 1088 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 ANGPTL3Q9Y5C1 460 aa16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 PCDHGA9Q9Y5G4 932 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-201ENST00000254193 C4orf51C9J302 202 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 WFS1O76024 890 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 SIX3O95343 332 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 SLU7O95391 586 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 ACPPP15309 386 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 EPB42P16452 691 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 PGDP52209 483 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 VSNL1P62760 191 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 NAA30Q147X3 362 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 TBCCQ15814 346 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 TSNAXIP1Q2TAA8 658 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 MINDY4Q4G0A6 757 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 MFSD4BQ5TF39 518 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 GALNT16Q8N428 558 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 PTGR2Q8N8N7 351 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 TTLQ8NG68 377 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 PEX11GQ96HA9 241 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 CCDC77Q9BR77 488 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 RBCK1Q9BYM8 510 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 VN1R1Q9GZP7 353 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 MLXIPLQ9NP71 852 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 PSMC3IPQ9P2W1 217 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 TBK1Q9UHD2 729 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 HEMK1Q9Y5R4 338 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 HEATR5BQ9P2D3 2071 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 SPTA1P02549 2419 aa16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 TLN1Q9Y490 2541 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-201ENST00000254193 PCM1Q15154 2024 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 A0A0G2JN53 185 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 IQANK1A0A1B0GTG1 560 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 LRIT2A6NDA9 550 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 URADA6NGE7 173 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 ANKDD1BA6NHY2 528 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 CHST10O43529 356 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 CLEC3AO75596 197 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 TBX6O95947 436 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 SMIM10L1P0DMW3 83 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 CASP2P42575 452 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 STXBP1P61764 594 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 AIMP2Q13155 320 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 LAPTM5Q13571 262 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 PCBP2Q15366 365 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 HIST2H2ACQ16777 129 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 TUBB8Q3ZCM7 444 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 PAGE2BQ5JRK9 111 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 HIST2H2AA3Q6FI13 130 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 PRICKLE2Q7Z3G6 844 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 PARP9Q8IXQ6 854 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 PHF21BQ96EK2 531 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 SMIM10Q96HG1 83 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 GPR83Q9NYM4 423 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 G3BP2Q9UN86 482 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 TNPO3Q9Y5L0 923 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 KALRNO60229 2985 aa16.97■□□□□ 0.31
SNRPA1-201ENST00000254193 FOXO6A8MYZ6 492 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 GOLGA8RI6L899 631 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 CDC123O75794 336 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 ITGA3P26006 1051 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 GSTM2P28161 218 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 SLCO1A2P46721 670 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 SKP1P63208 163 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 BTN3A2P78410 334 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 EEF1A2Q05639 463 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 PCDH1Q08174 1060 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 E2F2Q14209 437 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 MYLK4Q86YV6 388 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 TMEM151AQ8N4L1 468 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 MS4A6EQ96DS6 147 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 VPS50Q96JG6 964 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 MRPL57Q9BQC6 102 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 MRPL46Q9H2W6 279 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 RHBGQ9H310 441 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 ZNF160Q9HCG1 818 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 ANKRD12Q6UB98 2062 aa16.96■□□□□ 0.31
SNRPA1-201ENST00000254193 CFAP46Q8IYW2 2715 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SMIM23A6NLE4 172 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 E2F3O00716 465 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 ERI3O43414 337 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SUV39H1O43463 412 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SLC28A2O43868 658 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SMIM24O75264 130 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SBK3P0C264 359 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 C8orf89P0DMQ9 161 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 PYGBP11216 843 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms