RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 AP1M2Q9Y6Q5 423 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 SNRNP200O75643 2136 aaKnown RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 CCDC163A0A0D9SF12 145 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 ARHGAP10A1A4S6 786 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 CAPN5O15484 640 aaPredicted RBP17.33■□□□□ 0.37
VIM-201ENST00000224237 SCN2BO60939 215 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 BAG2O95816 211 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 LAMP1P11279 417 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 HTR1EP28566 365 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 BSGP35613 385 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 GSTM5P46439 218 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 TRPC1P48995 793 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 TAS2R50P59544 299 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 HHEXQ03014 270 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 CYP4F3Q08477 520 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 LRRC74AQ0VAA2 488 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 SELPLGQ14242 412 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 DUOXA1Q1HG43 343 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 TMEM35AQ53FP2 167 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 CCNYL2Q5T2Q4 361 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 ANXA8L1Q5VT79 327 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 FAM71E1Q6IPT2 247 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 LCN8Q6JVE9 175 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 GKN2Q86XP6 184 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 AVL9Q8NBF6 648 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 OR10G6Q8NH81 332 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 MTERF3Q96E29 417 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 OR2A14Q96R47 310 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 ECSITQ9BQ95 431 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 INPP5KQ9BT40 448 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 THUMPD3Q9BV44 507 aaKnown RBP17.33■□□□□ 0.37
VIM-201ENST00000224237 BHLHE41Q9C0J9 482 aaPredicted RBP17.33■□□□□ 0.37
VIM-201ENST00000224237 ACTR10Q9NZ32 417 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 EGFL7Q9UHF1 273 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 ADAM29Q9UKF5 820 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 PCDHGA4Q9Y5G9 962 aa17.33■□□□□ 0.37
VIM-201ENST00000224237 A0A0C4DFX4 3053 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 LAMA1P25391 3075 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 PRSS51A0A1B0GVH4 220 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 GSAPA4D1B5 854 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 OR6C74A6NCV1 312 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 LRIT2A6NDA9 550 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 B4DGG1 531 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 H3BNX3 289 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 ZW10O43264 779 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 SERPIND1P05546 499 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 UGT2B7P16662 529 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 HOXB9P17482 250 aaPredicted RBP17.33■□□□□ 0.36
VIM-201ENST00000224237 POLR2CP19387 275 aaPredicted RBP17.33■□□□□ 0.36
VIM-201ENST00000224237 HOXA6P31267 233 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 GRIA3P42263 894 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 NXPH1P58417 271 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 RHDQ02161 417 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 PDE7AQ13946 482 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 ZIC1Q15915 447 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 FXNQ16595 210 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 AASDHQ4L235 1098 aaPredicted RBP17.33■□□□□ 0.36
VIM-201ENST00000224237 WDR45BQ5MNZ6 344 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 ANKRD26P1Q6NSI1 321 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 CYP2R1Q6VVX0 501 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 LRRC74BQ6ZQY2 392 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 PAQR7Q86WK9 346 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 MFSD9Q8NBP5 474 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 PANX1Q96RD7 426 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 SORBS1Q9BX66 1292 aaKnown RBP17.33■□□□□ 0.36
VIM-201ENST00000224237 SH3BP4Q9P0V3 963 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 SPASTQ9UBP0 616 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 EXO1Q9UQ84 846 aaKnown RBP17.33■□□□□ 0.36
VIM-201ENST00000224237 BTBD3Q9Y2F9 522 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 LRRC42Q9Y546 428 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 SNX13Q9Y5W8 968 aa17.33■□□□□ 0.36
VIM-201ENST00000224237 C2orf74A8MZ97 194 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 KLHL18O94889 574 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 FKBP9O95302 570 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 B3GALT4O96024 378 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 FURINP09958 794 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 PTPN6P29350 595 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 FNTBP49356 437 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 MAPK12P53778 367 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 RPS15AP62244 130 aaKnown RBP17.32■□□□□ 0.36
VIM-201ENST00000224237 SIGLEC14Q08ET2 396 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 C2orf80Q0P641 193 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 GTDC1Q4AE62 458 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 SLC6A13Q9NSD5 602 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 ANKMY1Q9P2S6 941 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 BTNL2Q9UIR0 455 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 DOLKQ9UPQ8 538 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 ZDBF2Q9HCK1 2354 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 BDP1A6H8Y1 2624 aa17.32■□□□□ 0.36
VIM-201ENST00000224237 TCRBV3S1A0A5B6 114 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 AQP12BA6NM10 295 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 RTCAO00442 366 aaKnown RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 RNASET2O00584 256 aaKnown RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 ARPC2O15144 300 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 IL3P08700 152 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 HOXB3P14651 431 aaPredicted RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 ATP6V1B2P21281 511 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 VHLP40337 213 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 CDKN2CP42773 168 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms