RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	MND2	P40577	368 aa		4.82	□□□□□ -1.64
RUD3	YOR216C	MRL1	Q06815	381 aa		4.82	□□□□□ -1.64
RUD3	YOR216C	TPO1	Q07824	586 aa		4.82	□□□□□ -1.64
RUD3	YOR216C	RAD2	P07276	1031 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	MXR1	P40029	184 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	EXG2	P52911	562 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	ADY3	Q07732	790 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	UGA2	P38067	497 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	MET12	P46151	657 aa		4.81	□□□□□ -1.64
RUD3	YOR216C	BI4	P03879	638 aa		4.8	□□□□□ -1.64
RUD3	YOR216C	GCR1	P07261	785 aa		4.8	□□□□□ -1.64
RUD3	YOR216C	CYC8	P14922	966 aa		4.8	□□□□□ -1.64
RUD3	YOR216C	HFM1	P51979	1187 aa		4.8	□□□□□ -1.64
RUD3	YOR216C	RPL11A	P0C0W9	174 aa	Known RBP	4.79	□□□□□ -1.64
RUD3	YOR216C	DBP2	P24783	546 aa	Known RBP	4.79	□□□□□ -1.64
RUD3	YOR216C	RRT14	P40470	206 aa		4.79	□□□□□ -1.64
RUD3	YOR216C	CHA4	P43634	648 aa		4.79	□□□□□ -1.64
RUD3	YOR216C	RPL11B	Q3E757	174 aa	Predicted RBP	4.79	□□□□□ -1.64
RUD3	YOR216C	HIS5	P07172	385 aa		4.78	□□□□□ -1.64
RUD3	YOR216C	POA1	P38218	177 aa		4.78	□□□□□ -1.64
RUD3	YOR216C	IPL1	P38991	367 aa		4.78	□□□□□ -1.64
RUD3	YOR216C	RPS26A	P39938	119 aa	Known RBP	4.78	□□□□□ -1.64
RUD3	YOR216C	RPS26B	P39939	119 aa	Known RBP	4.78	□□□□□ -1.64
RUD3	YOR216C	ACM1	Q08981	209 aa		4.78	□□□□□ -1.64
RUD3	YOR216C	HRR25	P29295	494 aa	Known RBP	4.77	□□□□□ -1.65
RUD3	YOR216C	SLA2	P33338	968 aa		4.77	□□□□□ -1.65
RUD3	YOR216C	XYL2	Q07993	356 aa		4.77	□□□□□ -1.65
RUD3	YOR216C	SEC20	P28791	383 aa		4.76	□□□□□ -1.65
RUD3	YOR216C	RER2	P35196	286 aa		4.76	□□□□□ -1.65
RUD3	YOR216C	ZRG8	P40021	1076 aa		4.76	□□□□□ -1.65
RUD3	YOR216C	AIM39	Q08223	395 aa		4.76	□□□□□ -1.65
RUD3	YOR216C	GNT1	Q12096	491 aa		4.76	□□□□□ -1.65
RUD3	YOR216C	RPP2A	P05319	106 aa	Known RBP	4.75	□□□□□ -1.65
RUD3	YOR216C	PFK1	P16861	987 aa	Known RBP	4.75	□□□□□ -1.65
RUD3	YOR216C	GEM1	P39722	662 aa		4.75	□□□□□ -1.65
RUD3	YOR216C	TIF35	Q04067	274 aa	Known RBP	4.75	□□□□□ -1.65
RUD3	YOR216C	MCM7	P38132	845 aa		4.75	□□□□□ -1.65
RUD3	YOR216C	UBA2	P52488	636 aa		4.75	□□□□□ -1.65
RUD3	YOR216C	KCS1	Q12494	1050 aa		4.75	□□□□□ -1.65
RUD3	YOR216C	ENA1	P13587	1091 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	PNT1	P38969	423 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	MTC3	P53077	123 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	ENA2	Q01896	1091 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	ENB1	Q08299	606 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	ENA5	Q12691	1091 aa		4.74	□□□□□ -1.65
RUD3	YOR216C	MCM2	P29469	868 aa		4.73	□□□□□ -1.65
RUD3	YOR216C	ATF1	P40353	525 aa		4.73	□□□□□ -1.65
RUD3	YOR216C	QRI1	P43123	477 aa	Known RBP	4.73	□□□□□ -1.65
RUD3	YOR216C	THS1	P04801	734 aa	Known RBP	4.71	□□□□□ -1.66
RUD3	YOR216C	SNM1	P40993	198 aa		4.71	□□□□□ -1.66
RUD3	YOR216C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
RUD3	YOR216C	BDF2	Q07442	638 aa		4.71	□□□□□ -1.66
RUD3	YOR216C	LAS17	Q12446	633 aa		4.71	□□□□□ -1.66
RUD3	YOR216C	YAP1801	P38856	637 aa		4.7	□□□□□ -1.66
RUD3	YOR216C	BUL1	P48524	976 aa		4.7	□□□□□ -1.66
RUD3	YOR216C	SPP382	Q06411	708 aa	Predicted RBP	4.7	□□□□□ -1.66
RUD3	YOR216C	RAD27	P26793	382 aa		4.69	□□□□□ -1.66
RUD3	YOR216C	SEN54	Q02825	467 aa	Predicted RBP	4.69	□□□□□ -1.66
RUD3	YOR216C	SPR28	Q04921	423 aa		4.69	□□□□□ -1.66
RUD3	YOR216C	CDA1	Q06702	301 aa		4.69	□□□□□ -1.66
RUD3	YOR216C	RTT10	Q08924	1013 aa		4.69	□□□□□ -1.66
RUD3	YOR216C	OSW2	Q12202	724 aa		4.69	□□□□□ -1.66
RUD3	YOR216C	EFT1	P32324	842 aa	Known RBP	4.68	□□□□□ -1.66
RUD3	YOR216C	YGR012W	P53206	393 aa		4.68	□□□□□ -1.66
RUD3	YOR216C	TMN2	Q04562	672 aa		4.68	□□□□□ -1.66
RUD3	YOR216C	SPE1	P08432	466 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	YKL151C	P36059	337 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	STU2	P46675	888 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	YLR040C	Q07988	224 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	YOL073C	Q08232	322 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	NPC2	Q12408	173 aa		4.67	□□□□□ -1.66
RUD3	YOR216C	SRP101	P32916	621 aa		4.66	□□□□□ -1.66
RUD3	YOR216C	URM1	P40554	99 aa	Predicted RBP	4.66	□□□□□ -1.66
RUD3	YOR216C	NCS6	P53088	359 aa		4.66	□□□□□ -1.66
RUD3	YOR216C	GUP2	Q08929	609 aa		4.66	□□□□□ -1.66
RUD3	YOR216C	YPL066W	Q12194	479 aa		4.66	□□□□□ -1.66
RUD3	YOR216C	KTR4	P38131	464 aa		4.65	□□□□□ -1.66
RUD3	YOR216C	FYV10	P40492	516 aa		4.65	□□□□□ -1.66
RUD3	YOR216C	OMS1	Q06668	471 aa		4.65	□□□□□ -1.66
RUD3	YOR216C	KAR4	P25583	335 aa		4.64	□□□□□ -1.67
RUD3	YOR216C	CUE2	P36075	443 aa	Known RBP	4.64	□□□□□ -1.67
RUD3	YOR216C	MGE1	P38523	228 aa		4.64	□□□□□ -1.67
RUD3	YOR216C	HRQ1	Q05549	1077 aa		4.64	□□□□□ -1.67
RUD3	YOR216C	MCH5	Q08777	521 aa		4.64	□□□□□ -1.67
RUD3	YOR216C	ATE1	P16639	503 aa		4.63	□□□□□ -1.67
RUD3	YOR216C	LYP1	P32487	611 aa		4.63	□□□□□ -1.67
RUD3	YOR216C	MOT2	P34909	587 aa	Known RBP	4.63	□□□□□ -1.67
RUD3	YOR216C	ECM21	P38167	1117 aa	Known RBP	4.63	□□□□□ -1.67
RUD3	YOR216C	YJR107W	P47145	328 aa		4.63	□□□□□ -1.67
RUD3	YOR216C	WHI4	Q07655	649 aa	Known RBP	4.63	□□□□□ -1.67
RUD3	YOR216C	IRC10	Q08118	586 aa		4.63	□□□□□ -1.67
RUD3	YOR216C	MDM38	Q08179	573 aa		4.63	□□□□□ -1.67
RUD3	YOR216C	TMA46	Q12000	345 aa	Known RBP	4.63	□□□□□ -1.67
RUD3	YOR216C	TRP2	P00899	507 aa	Known RBP	4.62	□□□□□ -1.67
RUD3	YOR216C	INO1	P11986	533 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	DUT1	P33317	147 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	SUL1	P38359	859 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	POL32	P47110	350 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
RUD3	YOR216C	ESF1	Q06344	628 aa	Known RBP	4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms