RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W CWC24P53769 259 aa4.34□□□□□ -1.71
CTK3YML112W GCN5Q03330 439 aa4.34□□□□□ -1.71
CTK3YML112W YDR132CQ03900 495 aa4.34□□□□□ -1.71
CTK3YML112W SVF1Q05515 481 aa4.34□□□□□ -1.71
CTK3YML112W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
CTK3YML112W YLR358CO13565 187 aa4.33□□□□□ -1.72
CTK3YML112W THS1P04801 734 aaKnown RBP4.33□□□□□ -1.72
CTK3YML112W ACE2P21192 770 aa4.33□□□□□ -1.72
CTK3YML112W NAP1P25293 417 aaKnown RBP4.33□□□□□ -1.72
CTK3YML112W YKL107WP34251 309 aa4.33□□□□□ -1.72
CTK3YML112W DUS4Q06063 367 aa4.33□□□□□ -1.72
CTK3YML112W JIP5Q06214 492 aaPredicted RBP4.33□□□□□ -1.72
CTK3YML112W RIB2Q12362 591 aaKnown RBP4.33□□□□□ -1.72
CTK3YML112W PRE10P21242 288 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CTK3YML112W PIN4P34217 668 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CTK3YML112W SIP5P40210 489 aaKnown RBP4.32□□□□□ -1.72
CTK3YML112W RRT14P40470 206 aa4.32□□□□□ -1.72
CTK3YML112W PIN2Q12057 282 aa4.32□□□□□ -1.72
CTK3YML112W SNF7P39929 240 aaKnown RBP4.31□□□□□ -1.72
CTK3YML112W MTC3P53077 123 aa4.31□□□□□ -1.72
CTK3YML112W PBP1P53297 722 aaKnown RBP4.31□□□□□ -1.72
CTK3YML112W VPS16Q03308 798 aa4.31□□□□□ -1.72
CTK3YML112W MSC2Q03455 724 aa4.31□□□□□ -1.72
CTK3YML112W ESC2Q06340 456 aa4.31□□□□□ -1.72
CTK3YML112W ABD1P32783 436 aaPredicted RBP4.3□□□□□ -1.72
CTK3YML112W KRI1P42846 591 aaKnown RBP4.3□□□□□ -1.72
CTK3YML112W HFM1P51979 1187 aa4.3□□□□□ -1.72
CTK3YML112W SNU71P53207 620 aaKnown RBP4.3□□□□□ -1.72
CTK3YML112W SIZ1Q04195 904 aa4.3□□□□□ -1.72
CTK3YML112W RXT3Q07458 294 aa4.3□□□□□ -1.72
CTK3YML112W GPB1Q08886 897 aa4.3□□□□□ -1.72
CTK3YML112W TAD3Q9URQ3 322 aa4.3□□□□□ -1.72
CTK3YML112W DOM34P33309 386 aa4.29□□□□□ -1.72
CTK3YML112W YKL151CP36059 337 aa4.29□□□□□ -1.72
CTK3YML112W GTF1P53260 183 aaPredicted RBP4.29□□□□□ -1.72
CTK3YML112W CLU1Q03690 1277 aaKnown RBP4.29□□□□□ -1.72
CTK3YML112W FAL1Q12099 399 aaKnown RBP4.29□□□□□ -1.72
CTK3YML112W AGP1P25376 633 aa4.28□□□□□ -1.72
CTK3YML112W CDC20P26309 610 aa4.28□□□□□ -1.72
CTK3YML112W TAT2P38967 592 aa4.28□□□□□ -1.72
CTK3YML112W MBP1P39678 833 aa4.28□□□□□ -1.72
CTK3YML112W ACK1Q07622 623 aaPredicted RBP4.28□□□□□ -1.72
CTK3YML112W OPI10Q08202 246 aa4.28□□□□□ -1.72
CTK3YML112W OSW2Q12202 724 aa4.28□□□□□ -1.72
CTK3YML112W CDC6P09119 513 aa4.27□□□□□ -1.73
CTK3YML112W SBA1P28707 216 aaKnown RBP4.27□□□□□ -1.73
CTK3YML112W SHM2P37291 469 aaKnown RBP4.27□□□□□ -1.73
CTK3YML112W MPT5P39016 859 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
CTK3YML112W GCV2P49095 1034 aa4.27□□□□□ -1.73
CTK3YML112W HRQ1Q05549 1077 aa4.27□□□□□ -1.73
CTK3YML112W XYL2Q07993 356 aa4.27□□□□□ -1.73
CTK3YML112W PRI2P20457 528 aa4.26□□□□□ -1.73
CTK3YML112W SAH1P39954 449 aaKnown RBP4.26□□□□□ -1.73
CTK3YML112W MDM38Q08179 573 aa4.26□□□□□ -1.73
CTK3YML112W YLL058WQ12198 575 aa4.26□□□□□ -1.73
CTK3YML112W EMC1P25574 760 aa4.25□□□□□ -1.73
CTK3YML112W YPT53P36019 220 aa4.25□□□□□ -1.73
CTK3YML112W VBA5P36172 582 aa4.25□□□□□ -1.73
CTK3YML112W YAP1801P38856 637 aa4.25□□□□□ -1.73
CTK3YML112W VAC8P39968 578 aa4.25□□□□□ -1.73
CTK3YML112W ZRG8P40021 1076 aa4.25□□□□□ -1.73
CTK3YML112W MND2P40577 368 aa4.25□□□□□ -1.73
CTK3YML112W VPS62P53285 467 aa4.25□□□□□ -1.73
CTK3YML112W ENA1P13587 1091 aa4.24□□□□□ -1.73
CTK3YML112W CTS1P29029 562 aa4.24□□□□□ -1.73
CTK3YML112W LST4P34239 828 aa4.24□□□□□ -1.73
CTK3YML112W YKL069WP36088 180 aa4.24□□□□□ -1.73
CTK3YML112W ALD6P54115 500 aaKnown RBP4.24□□□□□ -1.73
CTK3YML112W ENA2Q01896 1091 aa4.24□□□□□ -1.73
CTK3YML112W SRP1Q02821 542 aaKnown RBP4.24□□□□□ -1.73
CTK3YML112W SRT1Q03175 343 aa4.24□□□□□ -1.73
CTK3YML112W SHE9Q04172 456 aa4.24□□□□□ -1.73
CTK3YML112W TPO1Q07824 586 aa4.24□□□□□ -1.73
CTK3YML112W HMI1Q12039 706 aa4.24□□□□□ -1.73
CTK3YML112W ENA5Q12691 1091 aa4.24□□□□□ -1.73
CTK3YML112W ECM21P38167 1117 aaKnown RBP4.23□□□□□ -1.73
CTK3YML112W POA1P38218 177 aa4.23□□□□□ -1.73
CTK3YML112W YAP6Q03935 383 aa4.23□□□□□ -1.73
CTK3YML112W YLR224WQ05947 369 aa4.23□□□□□ -1.73
CTK3YML112W FUN30P31380 1131 aa4.22□□□□□ -1.73
CTK3YML112W PAM1P37304 830 aaKnown RBP4.22□□□□□ -1.73
CTK3YML112W GIC1P38785 314 aa4.22□□□□□ -1.73
CTK3YML112W MET12P46151 657 aa4.22□□□□□ -1.73
CTK3YML112W MNN10P50108 393 aaKnown RBP4.22□□□□□ -1.73
CTK3YML112W MCM6P53091 1017 aaKnown RBP4.22□□□□□ -1.73
CTK3YML112W DUS3Q06053 668 aaKnown RBP4.22□□□□□ -1.73
CTK3YML112W TMA10Q06177 86 aa4.22□□□□□ -1.73
CTK3YML112W ADY3Q07732 790 aa4.22□□□□□ -1.73
CTK3YML112W NOP12Q08208 459 aaKnown RBP4.22□□□□□ -1.73
CTK3YML112W STE11P23561 717 aa4.21□□□□□ -1.74
CTK3YML112W CDC12P32468 407 aaKnown RBP4.21□□□□□ -1.74
CTK3YML112W PLB1P39105 664 aa4.21□□□□□ -1.74
CTK3YML112W YGR012WP53206 393 aa4.21□□□□□ -1.74
CTK3YML112W HIS5P07172 385 aa4.2□□□□□ -1.74
CTK3YML112W MRP8P35719 219 aa4.2□□□□□ -1.74
CTK3YML112W NPP2P39997 493 aa4.2□□□□□ -1.74
CTK3YML112W CHA4P43634 648 aa4.2□□□□□ -1.74
CTK3YML112W SFB2P53953 876 aa4.2□□□□□ -1.74
CTK3YML112W YDR306CQ06640 478 aa4.2□□□□□ -1.74
CTK3YML112W CDA1Q06702 301 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms