RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40B	YKR094C	YML122C	Q03207	126 aa		4.3	□□□□□ -1.72
RPL40B	YKR094C	BI4	P03879	638 aa		4.29	□□□□□ -1.72
RPL40B	YKR094C	GCR1	P07261	785 aa		4.29	□□□□□ -1.72
RPL40B	YKR094C	RPS26A	P39938	119 aa	Known RBP	4.29	□□□□□ -1.72
RPL40B	YKR094C	RPS26B	P39939	119 aa	Known RBP	4.29	□□□□□ -1.72
RPL40B	YKR094C	MND2	P40577	368 aa		4.29	□□□□□ -1.72
RPL40B	YKR094C	TPO1	Q07824	586 aa		4.29	□□□□□ -1.72
RPL40B	YKR094C	CYC8	P14922	966 aa		4.28	□□□□□ -1.72
RPL40B	YKR094C	HFM1	P51979	1187 aa		4.28	□□□□□ -1.72
RPL40B	YKR094C	RPL11A	P0C0W9	174 aa	Known RBP	4.27	□□□□□ -1.73
RPL40B	YKR094C	DBP2	P24783	546 aa	Known RBP	4.27	□□□□□ -1.73
RPL40B	YKR094C	MCM7	P38132	845 aa		4.27	□□□□□ -1.73
RPL40B	YKR094C	ADY3	Q07732	790 aa		4.27	□□□□□ -1.73
RPL40B	YKR094C	XYL2	Q07993	356 aa		4.27	□□□□□ -1.73
RPL40B	YKR094C	ACM1	Q08981	209 aa		4.27	□□□□□ -1.73
RPL40B	YKR094C	RPL11B	Q3E757	174 aa	Predicted RBP	4.27	□□□□□ -1.73
RPL40B	YKR094C	SEC20	P28791	383 aa		4.26	□□□□□ -1.73
RPL40B	YKR094C	ZRG8	P40021	1076 aa		4.26	□□□□□ -1.73
RPL40B	YKR094C	MET12	P46151	657 aa		4.26	□□□□□ -1.73
RPL40B	YKR094C	PPM2	Q08282	695 aa		4.26	□□□□□ -1.73
RPL40B	YKR094C	ENA1	P13587	1091 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	SLA2	P33338	968 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	RER2	P35196	286 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	POA1	P38218	177 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	RRT14	P40470	206 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	ENA2	Q01896	1091 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	TIF35	Q04067	274 aa	Known RBP	4.25	□□□□□ -1.73
RPL40B	YKR094C	GNT1	Q12096	491 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	ENA5	Q12691	1091 aa		4.25	□□□□□ -1.73
RPL40B	YKR094C	HIS5	P07172	385 aa		4.24	□□□□□ -1.73
RPL40B	YKR094C	HRR25	P29295	494 aa	Known RBP	4.24	□□□□□ -1.73
RPL40B	YKR094C	MCM2	P29469	868 aa		4.24	□□□□□ -1.73
RPL40B	YKR094C	MOH1	P38191	138 aa		4.24	□□□□□ -1.73
RPL40B	YKR094C	EXG2	P52911	562 aa		4.24	□□□□□ -1.73
RPL40B	YKR094C	PFK1	P16861	987 aa	Known RBP	4.23	□□□□□ -1.73
RPL40B	YKR094C	KCS1	Q12494	1050 aa		4.23	□□□□□ -1.73
RPL40B	YKR094C	OAR1	P35731	278 aa		4.22	□□□□□ -1.73
RPL40B	YKR094C	GEM1	P39722	662 aa		4.22	□□□□□ -1.73
RPL40B	YKR094C	IOC3	P43596	787 aa		4.22	□□□□□ -1.73
RPL40B	YKR094C	CHA4	P43634	648 aa		4.22	□□□□□ -1.73
RPL40B	YKR094C	AIM39	Q08223	395 aa		4.22	□□□□□ -1.73
RPL40B	YKR094C	PNT1	P38969	423 aa		4.21	□□□□□ -1.74
RPL40B	YKR094C	MTC3	P53077	123 aa		4.21	□□□□□ -1.74
RPL40B	YKR094C	SPR28	Q04921	423 aa		4.21	□□□□□ -1.74
RPL40B	YKR094C	SPP382	Q06411	708 aa	Predicted RBP	4.21	□□□□□ -1.74
RPL40B	YKR094C	UBA2	P52488	636 aa		4.2	□□□□□ -1.74
RPL40B	YKR094C	LAS17	Q12446	633 aa		4.2	□□□□□ -1.74
RPL40B	YKR094C	RAD27	P26793	382 aa		4.19	□□□□□ -1.74
RPL40B	YKR094C	YAP1801	P38856	637 aa		4.19	□□□□□ -1.74
RPL40B	YKR094C	SEN54	Q02825	467 aa	Predicted RBP	4.19	□□□□□ -1.74
RPL40B	YKR094C	THS1	P04801	734 aa	Known RBP	4.18	□□□□□ -1.74
RPL40B	YKR094C	SRP101	P32916	621 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	FYV10	P40492	516 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	CDA1	Q06702	301 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	RTT10	Q08924	1013 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	OSW2	Q12202	724 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	NPC2	Q12408	173 aa		4.18	□□□□□ -1.74
RPL40B	YKR094C	SPE1	P08432	466 aa		4.17	□□□□□ -1.74
RPL40B	YKR094C	YGR012W	P53206	393 aa		4.17	□□□□□ -1.74
RPL40B	YKR094C	YPL066W	Q12194	479 aa		4.17	□□□□□ -1.74
RPL40B	YKR094C	MOT2	P34909	587 aa	Known RBP	4.16	□□□□□ -1.74
RPL40B	YKR094C	MGE1	P38523	228 aa		4.16	□□□□□ -1.74
RPL40B	YKR094C	YLR040C	Q07988	224 aa		4.16	□□□□□ -1.74
RPL40B	YKR094C	TRP2	P00899	507 aa	Known RBP	4.15	□□□□□ -1.75
RPL40B	YKR094C	RPP2A	P05319	106 aa	Known RBP	4.15	□□□□□ -1.75
RPL40B	YKR094C	EFT1	P32324	842 aa	Known RBP	4.15	□□□□□ -1.75
RPL40B	YKR094C	YKL151C	P36059	337 aa		4.15	□□□□□ -1.75
RPL40B	YKR094C	POL32	P47110	350 aa		4.15	□□□□□ -1.75
RPL40B	YKR094C	BUL1	P48524	976 aa		4.15	□□□□□ -1.75
RPL40B	YKR094C	HRQ1	Q05549	1077 aa		4.15	□□□□□ -1.75
RPL40B	YKR094C	ATE1	P16639	503 aa		4.14	□□□□□ -1.75
RPL40B	YKR094C	NCS6	P53088	359 aa		4.14	□□□□□ -1.75
RPL40B	YKR094C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
RPL40B	YKR094C	ESF1	Q06344	628 aa	Known RBP	4.14	□□□□□ -1.75
RPL40B	YKR094C	WHI4	Q07655	649 aa	Known RBP	4.14	□□□□□ -1.75
RPL40B	YKR094C	MDM38	Q08179	573 aa		4.14	□□□□□ -1.75
RPL40B	YKR094C	YOL073C	Q08232	322 aa		4.14	□□□□□ -1.75
RPL40B	YKR094C	ENB1	Q08299	606 aa		4.14	□□□□□ -1.75
RPL40B	YKR094C	INO1	P11986	533 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	KAR4	P25583	335 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	LYP1	P32487	611 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	DUT1	P33317	147 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	SUL1	P38359	859 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	CCC2	P38995	1004 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	YJR107W	P47145	328 aa		4.13	□□□□□ -1.75
RPL40B	YKR094C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
RPL40B	YKR094C	TMA46	Q12000	345 aa	Known RBP	4.13	□□□□□ -1.75
RPL40B	YKR094C	ECM21	P38167	1117 aa	Known RBP	4.12	□□□□□ -1.75
RPL40B	YKR094C	GIC1	P38785	314 aa		4.12	□□□□□ -1.75
RPL40B	YKR094C	PSP2	P50109	593 aa	Known RBP	4.12	□□□□□ -1.75
RPL40B	YKR094C	EEB1	Q02891	456 aa		4.12	□□□□□ -1.75
RPL40B	YKR094C	TMN2	Q04562	672 aa		4.12	□□□□□ -1.75
RPL40B	YKR094C	HSF1	P10961	833 aa		4.11	□□□□□ -1.75
RPL40B	YKR094C	CAD1	P24813	409 aa	Known RBP	4.11	□□□□□ -1.75
RPL40B	YKR094C	ATF1	P40353	525 aa		4.11	□□□□□ -1.75
RPL40B	YKR094C	URM1	P40554	99 aa	Predicted RBP	4.11	□□□□□ -1.75
RPL40B	YKR094C	YGL176C	P46945	554 aa		4.11	□□□□□ -1.75
RPL40B	YKR094C	SRT1	Q03175	343 aa		4.11	□□□□□ -1.75
RPL40B	YKR094C	SLD2	P34252	453 aa		4.1	□□□□□ -1.75
RPL40B	YKR094C	NPP2	P39997	493 aa		4.1	□□□□□ -1.75

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