RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	PKH3	Q03306	898 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD4	YER162C	YLR326W	Q06170	240 aa	Known RBP	4.09	□□□□□ -1.75
RAD4	YER162C	YEL077C	Q3E7X8	1277 aa		4.09	□□□□□ -1.75
RAD4	YER162C	MET6	P05694	767 aa	Known RBP	4.09	□□□□□ -1.76
RAD4	YER162C	NUC1	P08466	329 aa		4.09	□□□□□ -1.76
RAD4	YER162C	COQ1	P18900	473 aa		4.09	□□□□□ -1.76
RAD4	YER162C	MBR1	P23493	339 aa		4.09	□□□□□ -1.76
RAD4	YER162C	SLX1	P38324	304 aa		4.09	□□□□□ -1.76
RAD4	YER162C	SAF1	P38352	637 aa		4.09	□□□□□ -1.76
RAD4	YER162C	VPS45	P38932	577 aa		4.09	□□□□□ -1.76
RAD4	YER162C	ALO1	P54783	526 aa	Known RBP	4.09	□□□□□ -1.76
RAD4	YER162C	SPO71	Q03868	1245 aa		4.09	□□□□□ -1.76
RAD4	YER162C	IRC10	Q08118	586 aa		4.09	□□□□□ -1.76
RAD4	YER162C	CDC53	Q12018	815 aa	Known RBP	4.09	□□□□□ -1.76
RAD4	YER162C	YDR461C-A	Q2V2P7	80 aa		4.09	□□□□□ -1.76
RAD4	YER162C	KEX2	P13134	814 aa		4.08	□□□□□ -1.76
RAD4	YER162C	KIN82	P25341	720 aa		4.08	□□□□□ -1.76
RAD4	YER162C	CDC11	P32458	415 aa		4.08	□□□□□ -1.76
RAD4	YER162C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RAD4	YER162C	DAK2	P43550	591 aa		4.08	□□□□□ -1.76
RAD4	YER162C	HOS2	P53096	452 aa	Predicted RBP	4.08	□□□□□ -1.76
RAD4	YER162C	LIF1	P53150	421 aa		4.08	□□□□□ -1.76
RAD4	YER162C	YNL108C	P53929	270 aa		4.08	□□□□□ -1.76
RAD4	YER162C	RPN4	Q03465	531 aa		4.08	□□□□□ -1.76
RAD4	YER162C	MRD1	Q06106	887 aa	Known RBP	4.08	□□□□□ -1.76
RAD4	YER162C	STB3	Q12427	513 aa		4.08	□□□□□ -1.76
RAD4	YER162C	NOT3	P06102	836 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	HO	P09932	586 aa		4.07	□□□□□ -1.76
RAD4	YER162C	YAP1801	P38856	637 aa		4.07	□□□□□ -1.76
RAD4	YER162C	SLN1	P39928	1220 aa	Predicted RBP	4.07	□□□□□ -1.76
RAD4	YER162C	BUD16	P39988	312 aa		4.07	□□□□□ -1.76
RAD4	YER162C	TAF1	P46677	1066 aa		4.07	□□□□□ -1.76
RAD4	YER162C	ENV11	P53246	860 aa		4.07	□□□□□ -1.76
RAD4	YER162C	HSP42	Q12329	375 aa		4.07	□□□□□ -1.76
RAD4	YER162C	QCR6	P00127	147 aa		4.07	□□□□□ -1.76
RAD4	YER162C	RPL40A	P0CH08	128 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	RPL40B	P0CH09	128 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	PPZ1	P26570	692 aa		4.07	□□□□□ -1.76
RAD4	YER162C	UGA4	P32837	571 aa		4.07	□□□□□ -1.76
RAD4	YER162C	MYO3	P36006	1272 aa		4.07	□□□□□ -1.76
RAD4	YER162C	PBY1	P38254	753 aa		4.07	□□□□□ -1.76
RAD4	YER162C	MGE1	P38523	228 aa		4.07	□□□□□ -1.76
RAD4	YER162C	YMR147W	P40218	223 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	YIL092W	P40497	633 aa		4.07	□□□□□ -1.76
RAD4	YER162C	RPS15	Q01855	142 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RAD4	YER162C	ATG16	Q03818	150 aa		4.07	□□□□□ -1.76
RAD4	YER162C	UTP14	Q04500	899 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	HEL2	Q05580	639 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	UTP4	Q06679	776 aa	Known RBP	4.07	□□□□□ -1.76
RAD4	YER162C	WHI5	Q12416	295 aa		4.07	□□□□□ -1.76
RAD4	YER162C	VPS5	Q92331	675 aa		4.07	□□□□□ -1.76
RAD4	YER162C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RAD4	YER162C	PRO3	P32263	286 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	SUV3	P32580	737 aa		4.06	□□□□□ -1.76
RAD4	YER162C	HMF1	P40037	129 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	INP51	P40559	946 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	BUD6	P41697	788 aa		4.06	□□□□□ -1.76
RAD4	YER162C	TIM54	P47045	478 aa		4.06	□□□□□ -1.76
RAD4	YER162C	RPS7B	P48164	190 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	SPO1	P53541	631 aa		4.06	□□□□□ -1.76
RAD4	YER162C	GRX3	Q03835	250 aa		4.06	□□□□□ -1.76
RAD4	YER162C	SPO20	Q04359	397 aa		4.06	□□□□□ -1.76
RAD4	YER162C	LCD1	Q04377	747 aa		4.06	□□□□□ -1.76
RAD4	YER162C	PHM6	Q05637	104 aa		4.06	□□□□□ -1.76
RAD4	YER162C	APL5	Q08951	932 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	COX6	P00427	148 aa		4.06	□□□□□ -1.76
RAD4	YER162C	INH1	P01097	85 aa		4.06	□□□□□ -1.76
RAD4	YER162C	IMG2	P25642	146 aa	Predicted RBP	4.06	□□□□□ -1.76
RAD4	YER162C	BRF1	P29056	596 aa		4.06	□□□□□ -1.76
RAD4	YER162C	BUD2	P33314	1104 aa		4.06	□□□□□ -1.76
RAD4	YER162C	ECM21	P38167	1117 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	APN2	P38207	520 aa		4.06	□□□□□ -1.76
RAD4	YER162C	HXT5	P38695	592 aa		4.06	□□□□□ -1.76
RAD4	YER162C	MMF1	P40185	145 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	LSB1	P53281	241 aa		4.06	□□□□□ -1.76
RAD4	YER162C	SRP1	Q02821	542 aa	Known RBP	4.06	□□□□□ -1.76
RAD4	YER162C	VPS30	Q02948	557 aa		4.06	□□□□□ -1.76
RAD4	YER162C	YLR455W	Q06188	304 aa		4.06	□□□□□ -1.76
RAD4	YER162C	CDC45	Q08032	650 aa		4.06	□□□□□ -1.76
RAD4	YER162C	YLL058W	Q12198	575 aa		4.06	□□□□□ -1.76
RAD4	YER162C	FOB1	O13329	566 aa		4.05	□□□□□ -1.76
RAD4	YER162C	CAN1	P04817	590 aa		4.05	□□□□□ -1.76
RAD4	YER162C	CHO2	P05374	869 aa	Known RBP	4.05	□□□□□ -1.76
RAD4	YER162C	ACE2	P21192	770 aa		4.05	□□□□□ -1.76
RAD4	YER162C	RAD27	P26793	382 aa		4.05	□□□□□ -1.76
RAD4	YER162C	ARP1	P38696	384 aa		4.05	□□□□□ -1.76
RAD4	YER162C	MEP1	P40260	492 aa		4.05	□□□□□ -1.76
RAD4	YER162C	MAD1	P40957	749 aa		4.05	□□□□□ -1.76
RAD4	YER162C	SEC27	P41811	889 aa	Known RBP	4.05	□□□□□ -1.76
RAD4	YER162C	GPI8	P49018	411 aa		4.05	□□□□□ -1.76
RAD4	YER162C	YDR344C	Q05510	147 aa		4.05	□□□□□ -1.76
RAD4	YER162C	PIG1	Q06216	648 aa		4.05	□□□□□ -1.76
RAD4	YER162C	MAK11	P20484	414 aa	Known RBP	4.05	□□□□□ -1.76
RAD4	YER162C	MSS51	P32335	436 aa		4.05	□□□□□ -1.76
RAD4	YER162C	TGL4	P36165	910 aa		4.05	□□□□□ -1.76
RAD4	YER162C	UBP14	P38237	781 aa	Known RBP	4.05	□□□□□ -1.76
RAD4	YER162C	RRP8	P38961	392 aa	Known RBP	4.05	□□□□□ -1.76
RAD4	YER162C	DJP1	P40564	432 aa		4.05	□□□□□ -1.76
RAD4	YER162C	YFL052W	P43551	465 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms