RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W AGP1P25376 633 aa5.31□□□□□ -1.56
LSM4YER112W SBA1P28707 216 aaKnown RBP5.31□□□□□ -1.56
LSM4YER112W YKL107WP34251 309 aa5.31□□□□□ -1.56
LSM4YER112W GNT1Q12096 491 aa5.31□□□□□ -1.56
LSM4YER112W SPO21Q12411 609 aa5.31□□□□□ -1.56
LSM4YER112W SNF5P18480 905 aa5.3□□□□□ -1.56
LSM4YER112W PRI2P20457 528 aa5.3□□□□□ -1.56
LSM4YER112W MLS1P30952 554 aa5.3□□□□□ -1.56
LSM4YER112W GPB2P39717 880 aa5.3□□□□□ -1.56
LSM4YER112W MPH1P40562 993 aa5.3□□□□□ -1.56
LSM4YER112W ROT1Q03691 256 aa5.3□□□□□ -1.56
LSM4YER112W TDA5Q06417 326 aaKnown RBP5.3□□□□□ -1.56
LSM4YER112W PUS9Q12069 462 aa5.3□□□□□ -1.56
LSM4YER112W PIN4P34217 668 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
LSM4YER112W PLB2Q03674 706 aa5.29□□□□□ -1.56
LSM4YER112W RSM24Q03976 319 aa5.29□□□□□ -1.56
LSM4YER112W SHE9Q04172 456 aa5.29□□□□□ -1.56
LSM4YER112W URN1Q06525 465 aaKnown RBP5.29□□□□□ -1.56
LSM4YER112W STE11P23561 717 aa5.28□□□□□ -1.56
LSM4YER112W ABD1P32783 436 aaPredicted RBP5.28□□□□□ -1.56
LSM4YER112W MOT2P34909 587 aaKnown RBP5.28□□□□□ -1.56
LSM4YER112W MRP8P35719 219 aa5.28□□□□□ -1.56
LSM4YER112W SPF1P39986 1215 aaKnown RBP5.28□□□□□ -1.56
LSM4YER112W MSE1P48525 536 aa5.28□□□□□ -1.56
LSM4YER112W NAN1Q02931 896 aaKnown RBP5.28□□□□□ -1.56
LSM4YER112W YLR225CQ05948 407 aaKnown RBP5.28□□□□□ -1.56
LSM4YER112W RXT3Q07458 294 aa5.28□□□□□ -1.56
LSM4YER112W SCT1P32784 759 aa5.27□□□□□ -1.57
LSM4YER112W YKL069WP36088 180 aa5.27□□□□□ -1.57
LSM4YER112W RFC5P38251 354 aa5.27□□□□□ -1.57
LSM4YER112W ACK1Q07622 623 aaPredicted RBP5.27□□□□□ -1.57
LSM4YER112W HCM1P25364 564 aa5.26□□□□□ -1.57
LSM4YER112W CDC20P26309 610 aa5.26□□□□□ -1.57
LSM4YER112W OCA5P38738 679 aa5.26□□□□□ -1.57
LSM4YER112W YGL176CP46945 554 aa5.26□□□□□ -1.57
LSM4YER112W MNN10P50108 393 aaKnown RBP5.26□□□□□ -1.57
LSM4YER112W PBP1P53297 722 aaKnown RBP5.26□□□□□ -1.57
LSM4YER112W SPP382Q06411 708 aaPredicted RBP5.26□□□□□ -1.57
LSM4YER112W GAL10P04397 699 aa5.25□□□□□ -1.57
LSM4YER112W GRX1P25373 110 aaKnown RBP5.25□□□□□ -1.57
LSM4YER112W ESC2Q06340 456 aa5.25□□□□□ -1.57
LSM4YER112W YER152CP10356 443 aa5.24□□□□□ -1.57
LSM4YER112W CMP2P14747 604 aa5.24□□□□□ -1.57
LSM4YER112W SRM1P21827 482 aa5.24□□□□□ -1.57
LSM4YER112W LST4P34239 828 aa5.24□□□□□ -1.57
LSM4YER112W VBA5P36172 582 aa5.24□□□□□ -1.57
LSM4YER112W PBY1P38254 753 aa5.24□□□□□ -1.57
LSM4YER112W IRR1P40541 1150 aa5.24□□□□□ -1.57
LSM4YER112W GPB1Q08886 897 aa5.24□□□□□ -1.57
LSM4YER112W YPL066WQ12194 479 aa5.24□□□□□ -1.57
LSM4YER112W YOL098CQ12496 1037 aa5.24□□□□□ -1.57
LSM4YER112W THS1P04801 734 aaKnown RBP5.23□□□□□ -1.57
LSM4YER112W CDC6P09119 513 aa5.23□□□□□ -1.57
LSM4YER112W KIN2P13186 1147 aaKnown RBP5.23□□□□□ -1.57
LSM4YER112W PRP9P19736 530 aaKnown RBP5.23□□□□□ -1.57
LSM4YER112W PMI40P29952 429 aaKnown RBP5.23□□□□□ -1.57
LSM4YER112W MCM6P53091 1017 aaKnown RBP5.23□□□□□ -1.57
LSM4YER112W TPO2P53283 614 aa5.23□□□□□ -1.57
LSM4YER112W SPO75Q07798 868 aa5.23□□□□□ -1.57
LSM4YER112W YTA7P40340 1379 aa5.23□□□□□ -1.57
LSM4YER112W RPL11AP0C0W9 174 aaKnown RBP5.22□□□□□ -1.57
LSM4YER112W STI1P15705 589 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
LSM4YER112W PNT1P38969 423 aa5.22□□□□□ -1.57
LSM4YER112W SLI1P53304 468 aa5.22□□□□□ -1.57
LSM4YER112W ACM1Q08981 209 aa5.22□□□□□ -1.57
LSM4YER112W NTO1Q12311 748 aa5.22□□□□□ -1.57
LSM4YER112W OSH2Q12451 1283 aa5.22□□□□□ -1.57
LSM4YER112W RPL11BQ3E757 174 aaPredicted RBP5.22□□□□□ -1.57
LSM4YER112W RAD4P14736 754 aa5.21□□□□□ -1.58
LSM4YER112W GEM1P39722 662 aa5.21□□□□□ -1.58
LSM4YER112W SIZ1Q04195 904 aa5.21□□□□□ -1.58
LSM4YER112W NSE3Q05541 303 aa5.21□□□□□ -1.58
LSM4YER112W TMA10Q06177 86 aa5.21□□□□□ -1.58
LSM4YER112W SVS1Q12254 260 aa5.21□□□□□ -1.58
LSM4YER112W RIB2Q12362 591 aaKnown RBP5.21□□□□□ -1.58
LSM4YER112W SRP40P32583 406 aaPredicted RBP5.2□□□□□ -1.58
LSM4YER112W YPT53P36019 220 aa5.2□□□□□ -1.58
LSM4YER112W YBR184WP38299 523 aa5.2□□□□□ -1.58
LSM4YER112W SIP5P40210 489 aaKnown RBP5.2□□□□□ -1.58
LSM4YER112W TIM54P47045 478 aa5.2□□□□□ -1.58
LSM4YER112W ERP6P53198 216 aa5.2□□□□□ -1.58
LSM4YER112W VPS62P53285 467 aa5.2□□□□□ -1.58
LSM4YER112W SUN4P53616 420 aa5.2□□□□□ -1.58
LSM4YER112W FPR4Q06205 392 aaPredicted RBP5.2□□□□□ -1.58
LSM4YER112W CDC53Q12018 815 aaKnown RBP5.2□□□□□ -1.58
LSM4YER112W YOR131CQ12486 218 aa5.2□□□□□ -1.58
LSM4YER112W CTF4Q01454 927 aa5.19□□□□□ -1.58
LSM4YER112W ATG13Q06628 738 aa5.19□□□□□ -1.58
LSM4YER112W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
LSM4YER112W STE5P32917 917 aa5.18□□□□□ -1.58
LSM4YER112W UGA2P38067 497 aa5.18□□□□□ -1.58
LSM4YER112W MBP1P39678 833 aa5.18□□□□□ -1.58
LSM4YER112W MXR1P40029 184 aa5.18□□□□□ -1.58
LSM4YER112W AIM21P40563 679 aa5.18□□□□□ -1.58
LSM4YER112W SRP1Q02821 542 aaKnown RBP5.18□□□□□ -1.58
LSM4YER112W BDF2Q07442 638 aa5.18□□□□□ -1.58
LSM4YER112W FMP25Q08023 583 aa5.18□□□□□ -1.58
LSM4YER112W HSP60P19882 572 aaKnown RBP5.17□□□□□ -1.58
LSM4YER112W APL1P27351 700 aa5.17□□□□□ -1.58
LSM4YER112W DCG1P32460 244 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms