RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ZRG8P40021 1076 aa3.32□□□□□ -1.88
CDC36YDL165W RRT14P40470 206 aa3.32□□□□□ -1.88
CDC36YDL165W STU2P46675 888 aa3.32□□□□□ -1.88
CDC36YDL165W ENT3P47160 408 aa3.32□□□□□ -1.88
CDC36YDL165W HXT17P53631 564 aa3.32□□□□□ -1.88
CDC36YDL165W HXT15P54854 567 aa3.32□□□□□ -1.88
CDC36YDL165W LAS17Q12446 633 aa3.32□□□□□ -1.88
CDC36YDL165W MXR1P40029 184 aa3.31□□□□□ -1.88
CDC36YDL165W CNN1P43618 361 aa3.31□□□□□ -1.88
CDC36YDL165W YLR040CQ07988 224 aa3.31□□□□□ -1.88
CDC36YDL165W YOL073CQ08232 322 aa3.31□□□□□ -1.88
CDC36YDL165W RLF2Q12495 606 aa3.31□□□□□ -1.88
CDC36YDL165W ENA1P13587 1091 aa3.3□□□□□ -1.88
CDC36YDL165W DBP5P20449 482 aaKnown RBP3.3□□□□□ -1.88
CDC36YDL165W EFT1P32324 842 aaKnown RBP3.3□□□□□ -1.88
CDC36YDL165W MPH1P40562 993 aa3.3□□□□□ -1.88
CDC36YDL165W BUL1P48524 976 aa3.3□□□□□ -1.88
CDC36YDL165W GNP1P48813 663 aa3.3□□□□□ -1.88
CDC36YDL165W ENA2Q01896 1091 aa3.3□□□□□ -1.88
CDC36YDL165W XYL2Q07993 356 aa3.3□□□□□ -1.88
CDC36YDL165W ENB1Q08299 606 aa3.3□□□□□ -1.88
CDC36YDL165W MCH5Q08777 521 aa3.3□□□□□ -1.88
CDC36YDL165W ENA5Q12691 1091 aa3.3□□□□□ -1.88
CDC36YDL165W SEC8P32855 1065 aa3.29□□□□□ -1.88
CDC36YDL165W SUL1P38359 859 aa3.29□□□□□ -1.88
CDC36YDL165W IRC10Q08118 586 aa3.29□□□□□ -1.88
CDC36YDL165W ACM1Q08981 209 aa3.29□□□□□ -1.88
CDC36YDL165W RPP2AP05319 106 aaKnown RBP3.28□□□□□ -1.88
CDC36YDL165W RPL11AP0C0W9 174 aaKnown RBP3.28□□□□□ -1.88
CDC36YDL165W PRE9P23638 258 aaKnown RBP3.28□□□□□ -1.88
CDC36YDL165W DBP2P24783 546 aaKnown RBP3.28□□□□□ -1.88
CDC36YDL165W STB4P50104 949 aa3.28□□□□□ -1.88
CDC36YDL165W RPL11BQ3E757 174 aaPredicted RBP3.28□□□□□ -1.88
CDC36YDL165W RPT1P33299 467 aaKnown RBP3.27□□□□□ -1.89
CDC36YDL165W SLA2P33338 968 aa3.27□□□□□ -1.89
CDC36YDL165W PPX1P38698 397 aa3.27□□□□□ -1.89
CDC36YDL165W GEM1P39722 662 aa3.27□□□□□ -1.89
CDC36YDL165W MRPS18P42847 217 aa3.27□□□□□ -1.89
CDC36YDL165W MCD1Q12158 566 aa3.27□□□□□ -1.89
CDC36YDL165W NPC2Q12408 173 aa3.27□□□□□ -1.89
CDC36YDL165W OMS1Q06668 471 aa3.26□□□□□ -1.89
CDC36YDL165W GNT1Q12096 491 aa3.26□□□□□ -1.89
CDC36YDL165W WHI5Q12416 295 aa3.26□□□□□ -1.89
CDC36YDL165W THS1P04801 734 aaKnown RBP3.25□□□□□ -1.89
CDC36YDL165W SPE1P08432 466 aa3.25□□□□□ -1.89
CDC36YDL165W KAR4P25583 335 aa3.25□□□□□ -1.89
CDC36YDL165W KTR4P38131 464 aa3.25□□□□□ -1.89
CDC36YDL165W YAP1801P38856 637 aa3.25□□□□□ -1.89
CDC36YDL165W MTC3P53077 123 aa3.25□□□□□ -1.89
CDC36YDL165W NCS6P53088 359 aa3.25□□□□□ -1.89
CDC36YDL165W YGR012WP53206 393 aa3.25□□□□□ -1.89
CDC36YDL165W YMR206WQ03695 313 aa3.25□□□□□ -1.89
CDC36YDL165W CDA1Q06702 301 aa3.25□□□□□ -1.89
CDC36YDL165W MRL1Q06815 381 aa3.25□□□□□ -1.89
CDC36YDL165W ACF2Q12168 779 aa3.25□□□□□ -1.89
CDC36YDL165W MTH1P35198 433 aa3.24□□□□□ -1.89
CDC36YDL165W YGR122WP53272 402 aa3.24□□□□□ -1.89
CDC36YDL165W NDJ1Q12366 352 aa3.24□□□□□ -1.89
CDC36YDL165W ERG4P25340 473 aa3.23□□□□□ -1.89
CDC36YDL165W MCM7P38132 845 aa3.23□□□□□ -1.89
CDC36YDL165W PNT1P38969 423 aa3.23□□□□□ -1.89
CDC36YDL165W TIM44Q01852 431 aa3.23□□□□□ -1.89
CDC36YDL165W MUK1Q02866 612 aa3.23□□□□□ -1.89
CDC36YDL165W TIF35Q04067 274 aaKnown RBP3.23□□□□□ -1.89
CDC36YDL165W OSW2Q12202 724 aa3.23□□□□□ -1.89
CDC36YDL165W GCR1P07261 785 aa3.22□□□□□ -1.89
CDC36YDL165W RAD2P07276 1031 aa3.22□□□□□ -1.89
CDC36YDL165W SRP101P32916 621 aa3.22□□□□□ -1.89
CDC36YDL165W GEF1P37020 779 aa3.22□□□□□ -1.89
CDC36YDL165W YER158CP40095 573 aa3.22□□□□□ -1.89
CDC36YDL165W URM1P40554 99 aaPredicted RBP3.22□□□□□ -1.89
CDC36YDL165W THI12P42883 340 aa3.22□□□□□ -1.89
CDC36YDL165W THI5P43534 340 aa3.22□□□□□ -1.89
CDC36YDL165W THI11P47183 340 aa3.22□□□□□ -1.89
CDC36YDL165W GND2P53319 492 aa3.22□□□□□ -1.89
CDC36YDL165W THI13Q07748 340 aa3.22□□□□□ -1.89
CDC36YDL165W MSC6Q08818 692 aaKnown RBP3.22□□□□□ -1.89
CDC36YDL165W GUP2Q08929 609 aa3.22□□□□□ -1.89
CDC36YDL165W CAD1P24813 409 aaKnown RBP3.21□□□□□ -1.9
CDC36YDL165W RER2P35196 286 aa3.21□□□□□ -1.9
CDC36YDL165W SPC42P36094 363 aa3.21□□□□□ -1.9
CDC36YDL165W CCC2P38995 1004 aa3.21□□□□□ -1.9
CDC36YDL165W SPP382Q06411 708 aaPredicted RBP3.21□□□□□ -1.9
CDC36YDL165W WHI4Q07655 649 aaKnown RBP3.21□□□□□ -1.9
CDC36YDL165W PEX2P32800 271 aa3.2□□□□□ -1.9
CDC36YDL165W PSP2P50109 593 aaKnown RBP3.2□□□□□ -1.9
CDC36YDL165W RNT1Q02555 471 aa3.2□□□□□ -1.9
CDC36YDL165W TRP4P07285 380 aaPredicted RBP3.19□□□□□ -1.9
CDC36YDL165W HSF1P10961 833 aa3.19□□□□□ -1.9
CDC36YDL165W CYC8P14922 966 aa3.19□□□□□ -1.9
CDC36YDL165W TRM13Q12383 476 aa3.19□□□□□ -1.9
CDC36YDL165W ATG19P35193 415 aa3.18□□□□□ -1.9
CDC36YDL165W ECM21P38167 1117 aaKnown RBP3.18□□□□□ -1.9
CDC36YDL165W SSF1P38789 453 aaPredicted RBP3.18□□□□□ -1.9
CDC36YDL165W STM1P39015 273 aaKnown RBP3.18□□□□□ -1.9
CDC36YDL165W PPR1P07272 904 aaPredicted RBP3.17□□□□□ -1.9
CDC36YDL165W ALG7P07286 448 aa3.17□□□□□ -1.9
CDC36YDL165W YKL151CP36059 337 aa3.17□□□□□ -1.9
CDC36YDL165W RPS26AP39938 119 aaKnown RBP3.17□□□□□ -1.9
CDC36YDL165W RPS26BP39939 119 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 130.8 ms