RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RFC4P35249 363 aa22.81■■□□□ 1.24
PHGDH-227ENST00000641811 KLHL34Q8N239 644 aa22.81■■□□□ 1.24
PHGDH-227ENST00000641811 STARD3NLO95772 234 aa22.8■■□□□ 1.24
PHGDH-227ENST00000641811 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
PHGDH-227ENST00000641811 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
PHGDH-227ENST00000641811 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
PHGDH-227ENST00000641811 SOS1Q07889 1333 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-227ENST00000641811 TEX13AQ9BXU3 409 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-227ENST00000641811 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
PHGDH-227ENST00000641811 C4AP0C0L4 1744 aa22.78■■□□□ 1.24
PHGDH-227ENST00000641811 TRIM35Q9UPQ4 493 aa22.78■■□□□ 1.24
PHGDH-227ENST00000641811 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
PHGDH-227ENST00000641811 A1BGP04217 495 aa22.77■■□□□ 1.24
PHGDH-227ENST00000641811 GYS1P13807 737 aa22.77■■□□□ 1.24
PHGDH-227ENST00000641811 LMOD3Q0VAK6 560 aa22.77■■□□□ 1.24
PHGDH-227ENST00000641811 PNISRQ8TF01 805 aaKnown RBP22.77■■□□□ 1.24
PHGDH-227ENST00000641811 APAF1O14727 1248 aa22.76■■□□□ 1.23
PHGDH-227ENST00000641811 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
PHGDH-227ENST00000641811 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
PHGDH-227ENST00000641811 COL15A1P39059 1388 aa22.75■■□□□ 1.23
PHGDH-227ENST00000641811 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
PHGDH-227ENST00000641811 MMP10P09238 476 aa22.74■■□□□ 1.23
PHGDH-227ENST00000641811 PIP4K2AP48426 406 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-227ENST00000641811 NLGN1Q8N2Q7 840 aa22.74■■□□□ 1.23
PHGDH-227ENST00000641811 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
PHGDH-227ENST00000641811 EIF5P55010 431 aaKnown RBP22.73■■□□□ 1.23
PHGDH-227ENST00000641811 EIF4A1P60842 406 aaKnown RBP22.73■■□□□ 1.23
PHGDH-227ENST00000641811 USPL1Q5W0Q7 1092 aa22.73■■□□□ 1.23
PHGDH-227ENST00000641811 TSPYL4Q9UJ04 414 aa22.73■■□□□ 1.23
PHGDH-227ENST00000641811 ZNF330Q9Y3S2 320 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-227ENST00000641811 FKBP8Q14318 412 aa22.72■■□□□ 1.23
PHGDH-227ENST00000641811 NLGN2Q8NFZ4 835 aa22.72■■□□□ 1.23
PHGDH-227ENST00000641811 ZPR1O75312 459 aa22.71■■□□□ 1.23
PHGDH-227ENST00000641811 NARFQ9UHQ1 456 aa22.7■■□□□ 1.22
PHGDH-227ENST00000641811 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
PHGDH-227ENST00000641811 GIGYF1O75420 1035 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-227ENST00000641811 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-227ENST00000641811 BCL2L12Q9HB09 334 aa22.68■■□□□ 1.22
PHGDH-227ENST00000641811 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
PHGDH-227ENST00000641811 NBPF26B4DH59 902 aa22.67■■□□□ 1.22
PHGDH-227ENST00000641811 NBPF10Q6P3W6 841 aaKnown RBP22.67■■□□□ 1.22
PHGDH-227ENST00000641811 NBPF15Q8N660 670 aa22.67■■□□□ 1.22
PHGDH-227ENST00000641811 A0A087WZG4 1122 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 CHL1O00533 1208 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 DDR1Q08345 913 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 CD2APQ9Y5K6 639 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 PARP3Q9Y6F1 533 aa22.66■■□□□ 1.22
PHGDH-227ENST00000641811 TM4SF1P30408 202 aa22.65■■□□□ 1.22
PHGDH-227ENST00000641811 NFIXQ14938 502 aa22.63■■□□□ 1.21
PHGDH-227ENST00000641811 KRT24Q2M2I5 525 aa22.63■■□□□ 1.21
PHGDH-227ENST00000641811 NPM2Q86SE8 214 aaKnown RBP22.63■■□□□ 1.21
PHGDH-227ENST00000641811 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
PHGDH-227ENST00000641811 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
PHGDH-227ENST00000641811 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
PHGDH-227ENST00000641811 POLRMTO00411 1230 aaKnown RBP22.62■■□□□ 1.21
PHGDH-227ENST00000641811 DZIP3Q86Y13 1208 aaKnown RBP22.62■■□□□ 1.21
PHGDH-227ENST00000641811 CAMTA2O94983 1202 aa22.61■■□□□ 1.21
PHGDH-227ENST00000641811 BICDL1Q6ZP65 573 aa22.61■■□□□ 1.21
PHGDH-227ENST00000641811 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
PHGDH-227ENST00000641811 CFAP44Q96MT7 982 aa22.61■■□□□ 1.21
PHGDH-227ENST00000641811 EIF2S2P20042 333 aaKnown RBP22.6■■□□□ 1.21
PHGDH-227ENST00000641811 NGEFQ8N5V2 710 aa22.6■■□□□ 1.21
PHGDH-227ENST00000641811 ZNF853P0CG23 659 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 MYL6BP14649 208 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 GPR162Q16538 588 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 TBC1D9BQ66K14 1250 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 MBIPQ9NS73 344 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 WWC3Q9ULE0 1092 aa22.59■■□□□ 1.21
PHGDH-227ENST00000641811 SCN7AQ01118 1682 aa22.58■■□□□ 1.21
PHGDH-227ENST00000641811 C10orf71Q711Q0 1435 aa22.58■■□□□ 1.21
PHGDH-227ENST00000641811 NECTIN2Q92692 538 aa22.58■■□□□ 1.21
PHGDH-227ENST00000641811 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
PHGDH-227ENST00000641811 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
PHGDH-227ENST00000641811 SERPINB2P05120 415 aa22.56■■□□□ 1.2
PHGDH-227ENST00000641811 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.22e-7■□□□□ 9.5
PHGDH-227ENST00000641811 GNAI1P63096 354 aa22.56■■□□□ 1.2
PHGDH-227ENST00000641811 CALD1Q05682 793 aaKnown RBP22.56■■□□□ 1.2
PHGDH-227ENST00000641811 A0A0G2JLW4 131 aa22.55■■□□□ 1.2
PHGDH-227ENST00000641811 ANXA1P04083 346 aa22.55■■□□□ 1.2
PHGDH-227ENST00000641811 PDIA6Q15084 440 aa22.55■■□□□ 1.2
PHGDH-227ENST00000641811 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
PHGDH-227ENST00000641811 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 PXDNLA1KZ92 1463 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 BCORQ6W2J9 1755 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 CCDC27Q2M243 656 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 TTLL7Q6ZT98 887 aa22.54■■□□□ 1.2
PHGDH-227ENST00000641811 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
PHGDH-227ENST00000641811 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.2
PHGDH-227ENST00000641811 KIAA1551Q9HCM1 1747 aa22.52■■□□□ 1.2
PHGDH-227ENST00000641811 DPEP1P16444 411 aa22.52■■□□□ 1.2
PHGDH-227ENST00000641811 TGFB2P61812 414 aa22.52■■□□□ 1.2
PHGDH-227ENST00000641811 HLFQ16534 295 aa22.52■■□□□ 1.2
PHGDH-227ENST00000641811 DUSP27Q5VZP5 1158 aa22.52■■□□□ 1.2
PHGDH-227ENST00000641811 N4BP2Q86UW6 1770 aaPredicted RBP22.52■■□□□ 1.2
PHGDH-227ENST00000641811 CLEC4GQ6UXB4 293 aa22.51■■□□□ 1.19
PHGDH-227ENST00000641811 LRP10Q7Z4F1 713 aa22.51■■□□□ 1.19
PHGDH-227ENST00000641811 SETDB2Q96T68 719 aa22.51■■□□□ 1.19
PHGDH-227ENST00000641811 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms