RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
SPIN3-238ENST00000640421 SMARCC1Q92922 1105 aaPredicted RBP22.74■■□□□ 1.23
SPIN3-238ENST00000640421 CACNA1FO60840 1977 aa22.74■■□□□ 1.23
SPIN3-238ENST00000640421 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
SPIN3-238ENST00000640421 KIF16BQ96L93 1317 aa22.73■■□□□ 1.23
SPIN3-238ENST00000640421 CICQ96RK0 1608 aaPredicted RBP22.73■■□□□ 1.23
SPIN3-238ENST00000640421 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
SPIN3-238ENST00000640421 LY75O60449 1722 aa22.72■■□□□ 1.23
SPIN3-238ENST00000640421 ITPK1Q13572 414 aa22.71■■□□□ 1.23
SPIN3-238ENST00000640421 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
SPIN3-238ENST00000640421 KCNQ4P56696 695 aa22.71■■□□□ 1.23
SPIN3-238ENST00000640421 PHAXQ9H814 394 aaKnown RBP22.71■■□□□ 1.23
SPIN3-238ENST00000640421 DBF4Q9UBU7 674 aaPredicted RBP22.71■■□□□ 1.23
SPIN3-238ENST00000640421 A1BGP04217 495 aa22.7■■□□□ 1.22
SPIN3-238ENST00000640421 TRIM27P14373 513 aa22.7■■□□□ 1.22
SPIN3-238ENST00000640421 CANXP27824 592 aaKnown RBP22.7■■□□□ 1.22
SPIN3-238ENST00000640421 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
SPIN3-238ENST00000640421 NBPF26B4DH59 902 aa22.69■■□□□ 1.22
SPIN3-238ENST00000640421 NBPF14Q5TI25 921 aa22.69■■□□□ 1.22
SPIN3-238ENST00000640421 ZKSCAN2Q63HK3 967 aa22.69■■□□□ 1.22
SPIN3-238ENST00000640421 NBPF10Q6P3W6 841 aaKnown RBP22.69■■□□□ 1.22
SPIN3-238ENST00000640421 LRP10Q7Z4F1 713 aa22.69■■□□□ 1.22
SPIN3-238ENST00000640421 NBPF15Q8N660 670 aa22.69■■□□□ 1.22
SPIN3-238ENST00000640421 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
SPIN3-238ENST00000640421 COL5A3P25940 1745 aaPredicted RBP22.69■■□□□ 1.22
SPIN3-238ENST00000640421 TNS1Q9HBL0 1735 aaKnown RBP22.69■■□□□ 1.22
SPIN3-238ENST00000640421 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
SPIN3-238ENST00000640421 RLBP1P12271 317 aa22.68■■□□□ 1.22
SPIN3-238ENST00000640421 DDX21Q9NR30 783 aaKnown RBP eCLIP22.68■■□□□ 1.22
SPIN3-238ENST00000640421 FLIIQ13045 1269 aa22.68■■□□□ 1.22
SPIN3-238ENST00000640421 ATF7IPQ6VMQ6 1270 aa22.68■■□□□ 1.22
SPIN3-238ENST00000640421 CLUAP1Q96AJ1 413 aa22.68■■□□□ 1.22
SPIN3-238ENST00000640421 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
SPIN3-238ENST00000640421 CHMP4AQ9BY43 222 aa22.68■■□□□ 1.22
SPIN3-238ENST00000640421 MYL6BP14649 208 aa22.67■■□□□ 1.22
SPIN3-238ENST00000640421 PANK1Q8TE04 598 aa22.66■■□□□ 1.22
SPIN3-238ENST00000640421 MYH14Q7Z406 1995 aaKnown RBP22.66■■□□□ 1.22
SPIN3-238ENST00000640421 ARHGAP45Q92619 1136 aa22.66■■□□□ 1.22
SPIN3-238ENST00000640421 STARD3NLO95772 234 aa22.65■■□□□ 1.22
SPIN3-238ENST00000640421 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
SPIN3-238ENST00000640421 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.22
SPIN3-238ENST00000640421 LINC00116Q8NCU8 138 aa22.64■■□□□ 1.22
SPIN3-238ENST00000640421 HYPKQ9NX55 129 aa22.64■■□□□ 1.22
SPIN3-238ENST00000640421 RREB1Q92766 1687 aa22.64■■□□□ 1.21
SPIN3-238ENST00000640421 PTPRCP08575 1304 aa22.64■■□□□ 1.21
SPIN3-238ENST00000640421 FKBP8Q14318 412 aa22.64■■□□□ 1.21
SPIN3-238ENST00000640421 CCNL1Q9UK58 526 aaPredicted RBP22.64■■□□□ 1.21
SPIN3-238ENST00000640421 ZBTB1Q9Y2K1 713 aa22.64■■□□□ 1.21
SPIN3-238ENST00000640421 TAF1LQ8IZX4 1826 aa22.64■■□□□ 1.21
SPIN3-238ENST00000640421 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
SPIN3-238ENST00000640421 LRRC4BQ9NT99 713 aa22.63■■□□□ 1.21
SPIN3-238ENST00000640421 NEFLP07196 543 aa22.62■■□□□ 1.21
SPIN3-238ENST00000640421 FKBP5Q13451 457 aaPredicted RBP22.62■■□□□ 1.21
SPIN3-238ENST00000640421 DZIP1LQ8IYY4 767 aaKnown RBP22.62■■□□□ 1.21
SPIN3-238ENST00000640421 F6X3S4 739 aa22.62■■□□□ 1.21
SPIN3-238ENST00000640421 CRKLP46109 303 aaKnown RBP22.62■■□□□ 1.21
SPIN3-238ENST00000640421 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
SPIN3-238ENST00000640421 ABCC4O15439 1325 aa22.61■■□□□ 1.21
SPIN3-238ENST00000640421 APBA3O96018 575 aa22.61■■□□□ 1.21
SPIN3-238ENST00000640421 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
SPIN3-238ENST00000640421 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
SPIN3-238ENST00000640421 GTF3C3Q9Y5Q9 886 aa22.61■■□□□ 1.21
SPIN3-238ENST00000640421 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
SPIN3-238ENST00000640421 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
SPIN3-238ENST00000640421 PROM2Q8N271 834 aa22.6■■□□□ 1.21
SPIN3-238ENST00000640421 API5Q9BZZ5 524 aaKnown RBP22.6■■□□□ 1.21
SPIN3-238ENST00000640421 ADCY9O60503 1353 aa22.6■■□□□ 1.21
SPIN3-238ENST00000640421 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
SPIN3-238ENST00000640421 CCDC87Q9NVE4 849 aa22.6■■□□□ 1.21
SPIN3-238ENST00000640421 COG6Q9Y2V7 657 aa22.6■■□□□ 1.21
SPIN3-238ENST00000640421 TMEM57Q8N5G2 664 aa22.59■■□□□ 1.21
SPIN3-238ENST00000640421 PLSCR1O15162 318 aa22.58■■□□□ 1.21
SPIN3-238ENST00000640421 EXOC6Q8TAG9 804 aa22.58■■□□□ 1.21
SPIN3-238ENST00000640421 PI4KAP2A4QPH2 592 aa22.58■■□□□ 1.2
SPIN3-238ENST00000640421 TTLL7Q6ZT98 887 aa22.58■■□□□ 1.2
SPIN3-238ENST00000640421 PI4KAP1Q8N8J0 262 aa22.58■■□□□ 1.2
SPIN3-238ENST00000640421 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
SPIN3-238ENST00000640421 C4BP0C0L5 1744 aa22.57■■□□□ 1.2
SPIN3-238ENST00000640421 TXNRD1Q16881 649 aa22.56■■□□□ 1.2
SPIN3-238ENST00000640421 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
SPIN3-238ENST00000640421 RGPD3A6NKT7 1758 aaPredicted RBP22.55■■□□□ 1.2
SPIN3-238ENST00000640421 RGPD4Q7Z3J3 1758 aa22.55■■□□□ 1.2
SPIN3-238ENST00000640421 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
SPIN3-238ENST00000640421 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
SPIN3-238ENST00000640421 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
SPIN3-238ENST00000640421 MS4A1P11836 297 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
SPIN3-238ENST00000640421 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
SPIN3-238ENST00000640421 MVPQ14764 893 aaKnown RBP22.54■■□□□ 1.2
SPIN3-238ENST00000640421 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 KSR2Q6VAB6 950 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 N4BP2Q86UW6 1770 aaPredicted RBP22.54■■□□□ 1.2
SPIN3-238ENST00000640421 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 SMIM5Q71RC9 77 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 AMIGO3Q86WK7 504 aa22.54■■□□□ 1.2
SPIN3-238ENST00000640421 INTS3Q68E01 1043 aaKnown RBP22.53■■□□□ 1.2
SPIN3-238ENST00000640421 ANKRD13DQ6ZTN6 518 aa22.53■■□□□ 1.2
SPIN3-238ENST00000640421 ITPRIPQ8IWB1 547 aa22.53■■□□□ 1.2
SPIN3-238ENST00000640421 DNAAF4Q8WXU2 420 aa22.53■■□□□ 1.2
SPIN3-238ENST00000640421 PXDNLA1KZ92 1463 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms