RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 SALL3Q9BXA9 1300 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 KCNJ4P48050 445 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-221ENST00000640341 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 MAP3K5Q99683 1374 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
SCARB2-221ENST00000640341 MBD3O95983 291 aa17.63■□□□□ 0.41
SCARB2-221ENST00000640341 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
SCARB2-221ENST00000640341 CNPY2Q9Y2B0 182 aa17.63■□□□□ 0.41
SCARB2-221ENST00000640341 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
SCARB2-221ENST00000640341 CASTP20810 708 aaKnown RBP17.63■□□□□ 0.41
SCARB2-221ENST00000640341 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
SCARB2-221ENST00000640341 AGLP35573 1532 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 FAM13BQ9NYF5 915 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 AK2P54819 239 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 DNTTIP2Q5QJE6 756 aaKnown RBP17.62■□□□□ 0.41
SCARB2-221ENST00000640341 ZNF830Q96NB3 372 aaPredicted RBP17.62■□□□□ 0.41
SCARB2-221ENST00000640341 SIL1Q9H173 461 aa17.62■□□□□ 0.41
SCARB2-221ENST00000640341 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.62■□□□□ 0.41
SCARB2-221ENST00000640341 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
SCARB2-221ENST00000640341 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-221ENST00000640341 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
SCARB2-221ENST00000640341 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
SCARB2-221ENST00000640341 DIP2BQ9P265 1576 aa17.61■□□□□ 0.41
SCARB2-221ENST00000640341 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
SCARB2-221ENST00000640341 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
SCARB2-221ENST00000640341 KDRP35968 1356 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 PRAMEF22A3QJZ6 481 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
SCARB2-221ENST00000640341 CUL4AQ13619 759 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
SCARB2-221ENST00000640341 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 ANAPC15P60006 121 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 PSME1Q06323 249 aa17.6■□□□□ 0.41
SCARB2-221ENST00000640341 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
SCARB2-221ENST00000640341 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
SCARB2-221ENST00000640341 WDR33Q9C0J8 1336 aaKnown RBP17.6■□□□□ 0.41
SCARB2-221ENST00000640341 HSPA4P34932 840 aa17.59■□□□□ 0.41
SCARB2-221ENST00000640341 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
SCARB2-221ENST00000640341 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
SCARB2-221ENST00000640341 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
SCARB2-221ENST00000640341 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
SCARB2-221ENST00000640341 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
SCARB2-221ENST00000640341 SGSM2O43147 1006 aa17.59■□□□□ 0.41
SCARB2-221ENST00000640341 USP25Q9UHP3 1055 aa17.59■□□□□ 0.41
SCARB2-221ENST00000640341 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.41
SCARB2-221ENST00000640341 PROSER3Q2NL68 480 aa17.58■□□□□ 0.4
SCARB2-221ENST00000640341 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.58■□□□□ 0.4
SCARB2-221ENST00000640341 NECAB1Q8N987 351 aa17.58■□□□□ 0.4
SCARB2-221ENST00000640341 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
SCARB2-221ENST00000640341 LARGE1O95461 756 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 CCDC8Q9H0W5 538 aaPredicted RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 OFD1O75665 1012 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
SCARB2-221ENST00000640341 PTH1RQ03431 593 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 AACSQ86V21 672 aa17.57■□□□□ 0.4
SCARB2-221ENST00000640341 SYT1P21579 422 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 GLIPR1L2Q4G1C9 344 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 RAD50Q92878 1312 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.56■□□□□ 0.4
SCARB2-221ENST00000640341 PHF8Q9UPP1 1060 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 TBX22Q9Y458 520 aa17.56■□□□□ 0.4
SCARB2-221ENST00000640341 NRKQ7Z2Y5 1582 aa17.55■□□□□ 0.4
SCARB2-221ENST00000640341 STX6O43752 255 aa17.55■□□□□ 0.4
SCARB2-221ENST00000640341 THEMISQ8N1K5 641 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-221ENST00000640341 ZKSCAN5Q9Y2L8 839 aa17.55■□□□□ 0.4
SCARB2-221ENST00000640341 LIMCH1Q9UPQ0 1083 aa17.55■□□□□ 0.4
SCARB2-221ENST00000640341 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
SCARB2-221ENST00000640341 PIP4K2AP48426 406 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-221ENST00000640341 C1orf141Q5JVX7 400 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
SCARB2-221ENST00000640341 RRP9O43818 475 aaKnown RBP17.54■□□□□ 0.4
SCARB2-221ENST00000640341 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 GIMAP6Q6P9H5 292 aa17.54■□□□□ 0.4
SCARB2-221ENST00000640341 PDLIM2Q96JY6 352 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms