RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
TARDBP-231ENST00000639599 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
TARDBP-231ENST00000639599 CHRNA5P30532 468 aa19.67■□□□□ 0.74
TARDBP-231ENST00000639599 C9orf131Q5VYM1 1079 aa19.67■□□□□ 0.74
TARDBP-231ENST00000639599 TEX13AQ9BXU3 409 aaPredicted RBP19.67■□□□□ 0.74
TARDBP-231ENST00000639599 TJP1Q07157 1748 aa19.67■□□□□ 0.74
TARDBP-231ENST00000639599 NPHP1O15259 732 aa19.66■□□□□ 0.74
TARDBP-231ENST00000639599 N4BP2Q86UW6 1770 aaPredicted RBP19.65■□□□□ 0.74
TARDBP-231ENST00000639599 TM4SF1P30408 202 aa19.65■□□□□ 0.74
TARDBP-231ENST00000639599 NFIXQ14938 502 aa19.65■□□□□ 0.74
TARDBP-231ENST00000639599 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
TARDBP-231ENST00000639599 RNF181Q9P0P0 153 aa19.65■□□□□ 0.74
TARDBP-231ENST00000639599 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
TARDBP-231ENST00000639599 KIF3CO14782 793 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 SERPINB2P05120 415 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 KCNA3P22001 575 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
TARDBP-231ENST00000639599 FMNL2Q96PY5 1086 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 KCPQ6ZWJ8 1503 aa19.64■□□□□ 0.73
TARDBP-231ENST00000639599 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
TARDBP-231ENST00000639599 MYH14Q7Z406 1995 aaKnown RBP19.63■□□□□ 0.73
TARDBP-231ENST00000639599 TOMM70O94826 608 aa19.62■□□□□ 0.73
TARDBP-231ENST00000639599 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-231ENST00000639599 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.733e-7■■■□□ 15.3
TARDBP-231ENST00000639599 ZNF496Q96IT1 587 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-231ENST00000639599 COL3A1P02461 1466 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-231ENST00000639599 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
TARDBP-231ENST00000639599 BTBD11A6QL63 1104 aa19.61■□□□□ 0.73
TARDBP-231ENST00000639599 NEFMP07197 916 aa19.61■□□□□ 0.73
TARDBP-231ENST00000639599 H0YIN7 160 aa19.6■□□□□ 0.73
TARDBP-231ENST00000639599 C2CD5Q86YS7 1000 aa19.6■□□□□ 0.73
TARDBP-231ENST00000639599 IL17REQ8NFR9 667 aa19.6■□□□□ 0.73
TARDBP-231ENST00000639599 KIAA1551Q9HCM1 1747 aa19.59■□□□□ 0.73
TARDBP-231ENST00000639599 APLP1P51693 650 aa19.59■□□□□ 0.73
TARDBP-231ENST00000639599 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
TARDBP-231ENST00000639599 NMRK2Q9NPI5 230 aa19.59■□□□□ 0.73
TARDBP-231ENST00000639599 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.72
TARDBP-231ENST00000639599 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
TARDBP-231ENST00000639599 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
TARDBP-231ENST00000639599 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
TARDBP-231ENST00000639599 PDZRN3Q9UPQ7 1066 aa19.57■□□□□ 0.72
TARDBP-231ENST00000639599 TBC1D2BQ9UPU7 963 aa19.57■□□□□ 0.72
TARDBP-231ENST00000639599 PDE6BP35913 854 aa19.56■□□□□ 0.72
TARDBP-231ENST00000639599 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.723e-23■□□□□ 9.1
TARDBP-231ENST00000639599 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
TARDBP-231ENST00000639599 ADAMTS7Q9UKP4 1686 aa19.56■□□□□ 0.72
TARDBP-231ENST00000639599 ST5P78524 1137 aa19.55■□□□□ 0.72
TARDBP-231ENST00000639599 RASSF7Q02833 373 aa19.55■□□□□ 0.72
TARDBP-231ENST00000639599 TBC1D9BQ66K14 1250 aa19.55■□□□□ 0.72
TARDBP-231ENST00000639599 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
TARDBP-231ENST00000639599 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
TARDBP-231ENST00000639599 LMNB1P20700 586 aa19.54■□□□□ 0.72
TARDBP-231ENST00000639599 PPP2R1AP30153 589 aa19.54■□□□□ 0.72
TARDBP-231ENST00000639599 RBM46Q8TBY0 533 aaKnown RBP19.54■□□□□ 0.72
TARDBP-231ENST00000639599 CEMIPQ8WUJ3 1361 aa19.54■□□□□ 0.72
TARDBP-231ENST00000639599 ZC3H4Q9UPT8 1303 aaKnown RBP19.53■□□□□ 0.72
TARDBP-231ENST00000639599 A1BGP04217 495 aa19.53■□□□□ 0.72
TARDBP-231ENST00000639599 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
TARDBP-231ENST00000639599 CNBD1Q8NA66 436 aa19.53■□□□□ 0.72
TARDBP-231ENST00000639599 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
TARDBP-231ENST00000639599 MCM10Q7L590 875 aa19.52■□□□□ 0.72
TARDBP-231ENST00000639599 BRIP1Q9BX63 1249 aa19.52■□□□□ 0.72
TARDBP-231ENST00000639599 RRAGCQ9HB90 399 aa19.52■□□□□ 0.72
TARDBP-231ENST00000639599 SNRPA1P09661 255 aaKnown RBP19.51■□□□□ 0.71
TARDBP-231ENST00000639599 KCNQ3O43525 872 aa19.5■□□□□ 0.71
TARDBP-231ENST00000639599 FSTL1Q12841 308 aa19.5■□□□□ 0.71
TARDBP-231ENST00000639599 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
TARDBP-231ENST00000639599 ARFGEF1Q9Y6D6 1849 aa19.5■□□□□ 0.71
TARDBP-231ENST00000639599 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
TARDBP-231ENST00000639599 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
TARDBP-231ENST00000639599 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
TARDBP-231ENST00000639599 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
TARDBP-231ENST00000639599 CCDC24Q8N4L8 307 aa19.49■□□□□ 0.71
TARDBP-231ENST00000639599 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
TARDBP-231ENST00000639599 DPY19L2Q6NUT2 758 aa19.48■□□□□ 0.71
TARDBP-231ENST00000639599 NBPF5PQ86XG9 351 aaPredicted RBP19.48■□□□□ 0.71
TARDBP-231ENST00000639599 SMC1BQ8NDV3 1235 aa19.48■□□□□ 0.71
TARDBP-231ENST00000639599 CNKSR1Q969H4 720 aa19.48■□□□□ 0.71
TARDBP-231ENST00000639599 C21orf2O43822 256 aa19.47■□□□□ 0.71
TARDBP-231ENST00000639599 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
TARDBP-231ENST00000639599 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
TARDBP-231ENST00000639599 DCTN1Q14203 1278 aa19.46■□□□□ 0.71
TARDBP-231ENST00000639599 SOGA3Q5TF21 947 aa19.46■□□□□ 0.71
TARDBP-231ENST00000639599 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
TARDBP-231ENST00000639599 PNNQ9H307 717 aaKnown RBP19.46■□□□□ 0.71
TARDBP-231ENST00000639599 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
TARDBP-231ENST00000639599 GLTPD2A6NH11 291 aa19.45■□□□□ 0.7
TARDBP-231ENST00000639599 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
TARDBP-231ENST00000639599 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
TARDBP-231ENST00000639599 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
TARDBP-231ENST00000639599 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
TARDBP-231ENST00000639599 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
TARDBP-231ENST00000639599 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
TARDBP-231ENST00000639599 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
TARDBP-231ENST00000639599 ERFEQ4G0M1 354 aa19.44■□□□□ 0.7
TARDBP-231ENST00000639599 STYK1Q6J9G0 422 aa19.44■□□□□ 0.7
TARDBP-231ENST00000639599 MASTLQ96GX5 879 aa19.44■□□□□ 0.7
TARDBP-231ENST00000639599 TAOK3Q9H2K8 898 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms