RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 CHRNA2Q15822 529 aa20.41■□□□□ 0.86
GFAP-233ENST00000639277 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
GFAP-233ENST00000639277 SPG7Q9UQ90 795 aa20.41■□□□□ 0.86
GFAP-233ENST00000639277 FNBP4Q8N3X1 1017 aaPredicted RBP20.4■□□□□ 0.86
GFAP-233ENST00000639277 KDM6AO15550 1401 aaPredicted RBP20.4■□□□□ 0.86
GFAP-233ENST00000639277 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.86
GFAP-233ENST00000639277 GSE1Q14687 1217 aa20.39■□□□□ 0.86
GFAP-233ENST00000639277 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.86
GFAP-233ENST00000639277 MRC1P22897 1456 aa20.39■□□□□ 0.85
GFAP-233ENST00000639277 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.85
GFAP-233ENST00000639277 PHKG2P15735 406 aa20.38■□□□□ 0.85
GFAP-233ENST00000639277 ATP8B2P98198 1209 aa20.38■□□□□ 0.85
GFAP-233ENST00000639277 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
GFAP-233ENST00000639277 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
GFAP-233ENST00000639277 APBB1O00213 710 aa20.37■□□□□ 0.85
GFAP-233ENST00000639277 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
GFAP-233ENST00000639277 OSBPL3Q9H4L5 887 aa20.37■□□□□ 0.85
GFAP-233ENST00000639277 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
GFAP-233ENST00000639277 CHMP5Q9NZZ3 219 aa20.37■□□□□ 0.85
GFAP-233ENST00000639277 KIF2CQ99661 725 aa20.36■□□□□ 0.85
GFAP-233ENST00000639277 USP21Q9UK80 565 aa20.36■□□□□ 0.85
GFAP-233ENST00000639277 SLIT2O94813 1529 aa20.36■□□□□ 0.85
GFAP-233ENST00000639277 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
GFAP-233ENST00000639277 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
GFAP-233ENST00000639277 PLCH1Q4KWH8 1693 aa20.36■□□□□ 0.85
GFAP-233ENST00000639277 TUBGCP6Q96RT7 1819 aa20.35■□□□□ 0.85
GFAP-233ENST00000639277 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
GFAP-233ENST00000639277 PHAXQ9H814 394 aaKnown RBP20.35■□□□□ 0.85
GFAP-233ENST00000639277 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
GFAP-233ENST00000639277 UBTFL1P0CB47 393 aaPredicted RBP20.34■□□□□ 0.85
GFAP-233ENST00000639277 SDSP20132 328 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 SPRYD3Q8NCJ5 442 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 WDR17Q8IZU2 1322 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
GFAP-233ENST00000639277 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 USP44Q9H0E7 712 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 PRDM11Q9NQV5 511 aa20.34■□□□□ 0.85
GFAP-233ENST00000639277 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
GFAP-233ENST00000639277 LRRFIP2Q9Y608 721 aaKnown RBP20.34■□□□□ 0.85
GFAP-233ENST00000639277 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
GFAP-233ENST00000639277 C5P01031 1676 aa20.33■□□□□ 0.84
GFAP-233ENST00000639277 ATRNO75882 1429 aa20.33■□□□□ 0.84
GFAP-233ENST00000639277 PDE1AP54750 535 aa20.33■□□□□ 0.84
GFAP-233ENST00000639277 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
GFAP-233ENST00000639277 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
GFAP-233ENST00000639277 EXOC6BQ9Y2D4 811 aa20.32■□□□□ 0.84
GFAP-233ENST00000639277 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
GFAP-233ENST00000639277 SALL3Q9BXA9 1300 aa20.31■□□□□ 0.84
GFAP-233ENST00000639277 CYP27B1O15528 508 aa20.31■□□□□ 0.84
GFAP-233ENST00000639277 RXRBP28702 533 aa20.31■□□□□ 0.84
GFAP-233ENST00000639277 ZNF790Q6PG37 636 aa20.3■□□□□ 0.84
GFAP-233ENST00000639277 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
GFAP-233ENST00000639277 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
GFAP-233ENST00000639277 ADCY9O60503 1353 aa20.3■□□□□ 0.84
GFAP-233ENST00000639277 GLI3P10071 1580 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 USP26Q9BXU7 913 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
GFAP-233ENST00000639277 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 DDIT3P35638 169 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 RABEP1Q15276 862 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 SSH3Q8TE77 659 aa20.29■□□□□ 0.84
GFAP-233ENST00000639277 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
GFAP-233ENST00000639277 REC8O95072 547 aa20.28■□□□□ 0.84
GFAP-233ENST00000639277 BEND3Q5T5X7 828 aa20.28■□□□□ 0.84
GFAP-233ENST00000639277 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
GFAP-233ENST00000639277 MX1P20591 662 aa20.27■□□□□ 0.84
GFAP-233ENST00000639277 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.84
GFAP-233ENST00000639277 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
GFAP-233ENST00000639277 AOX1Q06278 1338 aa20.27■□□□□ 0.83
GFAP-233ENST00000639277 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.83
GFAP-233ENST00000639277 PI4KAP2A4QPH2 592 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 RAB11FIP3O75154 756 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 RBM6P78332 1123 aaKnown RBP20.26■□□□□ 0.83
GFAP-233ENST00000639277 PI4KAP1Q8N8J0 262 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 POLA2Q14181 598 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
GFAP-233ENST00000639277 STAP2Q9UGK3 403 aa20.26■□□□□ 0.83
GFAP-233ENST00000639277 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
GFAP-233ENST00000639277 SRCAPQ6ZRS2 3230 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 ERC2O15083 957 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 ANXA1P04083 346 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 MCM4P33991 863 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 BTG4Q9NY30 223 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
GFAP-233ENST00000639277 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
GFAP-233ENST00000639277 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
GFAP-233ENST00000639277 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
GFAP-233ENST00000639277 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
GFAP-233ENST00000639277 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
GFAP-233ENST00000639277 PPP1R42Q7Z4L9 355 aa20.23■□□□□ 0.83
GFAP-233ENST00000639277 GJD4Q96KN9 370 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms