RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 SDSP20132 328 aa20.48■□□□□ 0.87
CTSD-213ENST00000637915 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
CTSD-213ENST00000637915 SSH3Q8TE77 659 aa20.48■□□□□ 0.87
CTSD-213ENST00000637915 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
CTSD-213ENST00000637915 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
CTSD-213ENST00000637915 SALL3Q9BXA9 1300 aa20.47■□□□□ 0.87
CTSD-213ENST00000637915 PDE1AP54750 535 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 HYPKQ9NX55 129 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 PARP4Q9UKK3 1724 aaKnown RBP20.46■□□□□ 0.87
CTSD-213ENST00000637915 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
CTSD-213ENST00000637915 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
CTSD-213ENST00000637915 TUBGCP6Q96RT7 1819 aa20.45■□□□□ 0.86
CTSD-213ENST00000637915 POLA2Q14181 598 aa20.45■□□□□ 0.86
CTSD-213ENST00000637915 KSR2Q6VAB6 950 aa20.45■□□□□ 0.86
CTSD-213ENST00000637915 KIF2CQ99661 725 aa20.45■□□□□ 0.86
CTSD-213ENST00000637915 DDX21Q9NR30 783 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTSD-213ENST00000637915 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
CTSD-213ENST00000637915 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
CTSD-213ENST00000637915 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
CTSD-213ENST00000637915 PDIA6Q15084 440 aa20.44■□□□□ 0.86
CTSD-213ENST00000637915 NHSL1Q5SYE7 1610 aa20.44■□□□□ 0.86
CTSD-213ENST00000637915 COL5A2P05997 1499 aaPredicted RBP20.44■□□□□ 0.86
CTSD-213ENST00000637915 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
CTSD-213ENST00000637915 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
CTSD-213ENST00000637915 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
CTSD-213ENST00000637915 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
CTSD-213ENST00000637915 MX1P20591 662 aa20.41■□□□□ 0.86
CTSD-213ENST00000637915 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
CTSD-213ENST00000637915 SNX21Q969T3 373 aa20.41■□□□□ 0.86
CTSD-213ENST00000637915 DEKP35659 375 aaKnown RBP20.4■□□□□ 0.86
CTSD-213ENST00000637915 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
CTSD-213ENST00000637915 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
CTSD-213ENST00000637915 RAB11FIP3O75154 756 aa20.39■□□□□ 0.86
CTSD-213ENST00000637915 DDX58O95786 925 aaKnown RBP20.39■□□□□ 0.86
CTSD-213ENST00000637915 CWF19L2Q2TBE0 894 aaKnown RBP20.39■□□□□ 0.86
CTSD-213ENST00000637915 TSHZ3Q63HK5 1081 aa20.39■□□□□ 0.86
CTSD-213ENST00000637915 GLI3P10071 1580 aa20.39■□□□□ 0.85
CTSD-213ENST00000637915 FRAT2O75474 233 aaPredicted RBP20.39■□□□□ 0.85
CTSD-213ENST00000637915 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
CTSD-213ENST00000637915 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
CTSD-213ENST00000637915 STAP2Q9UGK3 403 aa20.39■□□□□ 0.85
CTSD-213ENST00000637915 CABP4P57796 275 aa20.38■□□□□ 0.85
CTSD-213ENST00000637915 AIMP1Q12904 312 aaKnown RBP20.38■□□□□ 0.85
CTSD-213ENST00000637915 MTX1Q13505 466 aa20.38■□□□□ 0.85
CTSD-213ENST00000637915 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
CTSD-213ENST00000637915 LINS1Q8NG48 757 aa20.38■□□□□ 0.85
CTSD-213ENST00000637915 C9orf78Q9NZ63 289 aaPredicted RBP20.38■□□□□ 0.85
CTSD-213ENST00000637915 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
CTSD-213ENST00000637915 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
CTSD-213ENST00000637915 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
CTSD-213ENST00000637915 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
CTSD-213ENST00000637915 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
CTSD-213ENST00000637915 IL1RAPL2Q9NP60 686 aa20.37■□□□□ 0.85
CTSD-213ENST00000637915 LAMB4A4D0S4 1761 aa20.36■□□□□ 0.85
CTSD-213ENST00000637915 MYL6BP14649 208 aa20.36■□□□□ 0.85
CTSD-213ENST00000637915 ZCRB1Q8TBF4 217 aaKnown RBP20.36■□□□□ 0.85
CTSD-213ENST00000637915 RHPN1Q8TCX5 695 aa20.36■□□□□ 0.85
CTSD-213ENST00000637915 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
CTSD-213ENST00000637915 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 UTYO14607 1347 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 AOX1Q06278 1338 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 LRP10Q7Z4F1 713 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 KIF1BPQ96EK5 621 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
CTSD-213ENST00000637915 GRM8O00222 908 aa20.34■□□□□ 0.85
CTSD-213ENST00000637915 RIC3Q7Z5B4 369 aa20.34■□□□□ 0.85
CTSD-213ENST00000637915 XAGE3Q8WTP9 111 aa20.34■□□□□ 0.85
CTSD-213ENST00000637915 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
CTSD-213ENST00000637915 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
CTSD-213ENST00000637915 ERC2O15083 957 aa20.33■□□□□ 0.84
CTSD-213ENST00000637915 CD2BP2O95400 341 aaKnown RBP20.33■□□□□ 0.84
CTSD-213ENST00000637915 IGKV5-2P06315 115 aa20.33■□□□□ 0.84
CTSD-213ENST00000637915 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.84
CTSD-213ENST00000637915 LARP1Q6PKG0 1096 aaKnown RBP20.33■□□□□ 0.84
CTSD-213ENST00000637915 COPS6Q7L5N1 327 aa20.33■□□□□ 0.84
CTSD-213ENST00000637915 UBR2Q8IWV8 1755 aa20.32■□□□□ 0.84
CTSD-213ENST00000637915 REC8O95072 547 aa20.32■□□□□ 0.84
CTSD-213ENST00000637915 IL2RBP14784 551 aa20.32■□□□□ 0.84
CTSD-213ENST00000637915 NUTM1Q86Y26 1132 aa20.32■□□□□ 0.84
CTSD-213ENST00000637915 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
CTSD-213ENST00000637915 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
CTSD-213ENST00000637915 KAZALD1Q96I82 304 aa20.31■□□□□ 0.84
CTSD-213ENST00000637915 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
CTSD-213ENST00000637915 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
CTSD-213ENST00000637915 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
CTSD-213ENST00000637915 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
CTSD-213ENST00000637915 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
CTSD-213ENST00000637915 ERVV-2B6SEH9 535 aa20.3■□□□□ 0.84
CTSD-213ENST00000637915 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
CTSD-213ENST00000637915 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
CTSD-213ENST00000637915 METTL22Q9BUU2 404 aaPredicted RBP20.3■□□□□ 0.84
CTSD-213ENST00000637915 ARFGEF2Q9Y6D5 1785 aa20.29■□□□□ 0.84
CTSD-213ENST00000637915 DDIT3P35638 169 aa20.29■□□□□ 0.84
CTSD-213ENST00000637915 RABEP1Q15276 862 aa20.29■□□□□ 0.84
CTSD-213ENST00000637915 UNC5CLQ8IV45 518 aa20.29■□□□□ 0.84
CTSD-213ENST00000637915 RILPL2Q969X0 211 aa20.29■□□□□ 0.84
CTSD-213ENST00000637915 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms