RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 NBPF15Q8N660 670 aa6.37□□□□□ -1.39
CHD2-228ENST00000637613 MAFBQ9Y5Q3 323 aaPredicted RBP6.37□□□□□ -1.39
CHD2-228ENST00000637613 THBS1P07996 1170 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 EPXP11678 715 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 TRIM52Q96A61 297 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 GGA1Q9UJY5 639 aa6.36□□□□□ -1.39
CHD2-228ENST00000637613 CARNS1A5YM72 827 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 RAB15P59190 212 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 ELOAQ14241 798 aaKnown RBP6.35□□□□□ -1.39
CHD2-228ENST00000637613 NR6A1Q15406 480 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 TIMMDC1Q9NPL8 285 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 FKBPLQ9UIM3 349 aa6.35□□□□□ -1.39
CHD2-228ENST00000637613 GNEQ9Y223 722 aaKnown RBP6.35□□□□□ -1.39
CHD2-228ENST00000637613 ZC3H4Q9UPT8 1303 aaKnown RBP6.34□□□□□ -1.39
CHD2-228ENST00000637613 ATP5J2-PTCD1G3V325 749 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 MEN1O00255 615 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 YBX3P16989 372 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD2-228ENST00000637613 SLC27A3Q5K4L6 730 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
CHD2-228ENST00000637613 TBC1D9Q6ZT07 1266 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 FOXD4L4Q8WXT5 416 aaPredicted RBP6.34□□□□□ -1.39
CHD2-228ENST00000637613 OCSTAMPQ9BR26 566 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 GRIP2Q9C0E4 1043 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 AMOTL2Q9Y2J4 779 aa6.34□□□□□ -1.39
CHD2-228ENST00000637613 ARID1BQ8NFD5 2236 aaPredicted RBP6.34□□□□□ -1.39
CHD2-228ENST00000637613 C2CD2LO14523 706 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 ATP9BO43861 1147 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 BMP4P12644 408 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 PTK2Q05397 1052 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 SEMA3FQ13275 785 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 SND1Q7KZF4 910 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-228ENST00000637613 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 GPSM3Q9Y4H4 160 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
CHD2-228ENST00000637613 A0A1W2PRU2 124 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 ESPNB1AK53 854 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 HYAL3O43820 417 aaPredicted RBP6.32□□□□□ -1.4
CHD2-228ENST00000637613 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD2-228ENST00000637613 UBAP2LQ14157 1087 aaKnown RBP6.32□□□□□ -1.4
CHD2-228ENST00000637613 MCTP1Q6DN14 999 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 NFATC2IPQ8NCF5 419 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 ADAM32Q8TC27 787 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 CYLDQ9NQC7 956 aa6.32□□□□□ -1.4
CHD2-228ENST00000637613 ATXN7L1Q9ULK2 861 aaPredicted RBP6.32□□□□□ -1.4
CHD2-228ENST00000637613 TXKP42681 527 aa6.31□□□□□ -1.4
CHD2-228ENST00000637613 NR1H3Q13133 447 aa6.31□□□□□ -1.4
CHD2-228ENST00000637613 LBRQ14739 615 aaKnown RBP6.31□□□□□ -1.4
CHD2-228ENST00000637613 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
CHD2-228ENST00000637613 PNMA1Q8ND90 353 aa6.31□□□□□ -1.4
CHD2-228ENST00000637613 ZNF428Q96B54 188 aa6.31□□□□□ -1.4
CHD2-228ENST00000637613 WASLO00401 505 aaPredicted RBP6.3□□□□□ -1.4
CHD2-228ENST00000637613 ARAFP10398 606 aa6.3□□□□□ -1.4
CHD2-228ENST00000637613 CHSY3Q70JA7 882 aa6.3□□□□□ -1.4
CHD2-228ENST00000637613 TRIM11Q96F44 468 aa6.3□□□□□ -1.4
CHD2-228ENST00000637613 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
CHD2-228ENST00000637613 PAX4O43316 350 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 FBXO45P0C2W1 286 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 CDCA8Q53HL2 280 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 SEPT12Q8IYM1 358 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 ZMIZ1Q9ULJ6 1067 aa6.29□□□□□ -1.4
CHD2-228ENST00000637613 ZBBXA8MT70 800 aa6.28□□□□□ -1.4
CHD2-228ENST00000637613 FGFR3P22607 806 aa6.28□□□□□ -1.4
CHD2-228ENST00000637613 RBM25P49756 843 aaKnown RBP6.28□□□□□ -1.4
CHD2-228ENST00000637613 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
CHD2-228ENST00000637613 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
CHD2-228ENST00000637613 GPAMQ9HCL2 828 aa6.28□□□□□ -1.4
CHD2-228ENST00000637613 NEURL1BA8MQ27 555 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 PIK3CDO00329 1044 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 CTBSQ01459 385 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 CLN3Q13286 438 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 KRTAP4-2Q9BYR5 136 aa6.27□□□□□ -1.41
CHD2-228ENST00000637613 A0A1B0GTH6 734 aa6.26□□□□□ -1.41
CHD2-228ENST00000637613 TMEM164Q5U3C3 297 aa6.26□□□□□ -1.41
CHD2-228ENST00000637613 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
CHD2-228ENST00000637613 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
CHD2-228ENST00000637613 FMNL2Q96PY5 1086 aa6.26□□□□□ -1.41
CHD2-228ENST00000637613 NDFIP2Q9NV92 336 aa6.26□□□□□ -1.41
CHD2-228ENST00000637613 USP17L3A6NCW0 530 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 USP17L4A6NCW7 530 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 FAM196BA6NMK8 535 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 E9PSI1 815 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 APBA3O96018 575 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 H2AFB2P0C5Z0 115 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 FAM69CQ0P6D2 419 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 USP17L2Q6R6M4 530 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 USP17L1Q7RTZ2 530 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 PHTF2Q8N3S3 785 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 STK32AQ8WU08 396 aa6.25□□□□□ -1.41
CHD2-228ENST00000637613 CHIC2Q9UKJ5 165 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms