RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PAIP2Q9BPZ3 127 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-227ENST00000636549 SH3BP5O60239 455 aa20.73■□□□□ 0.91
CACNA1A-227ENST00000636549 TAF12Q16514 161 aa20.73■□□□□ 0.91
CACNA1A-227ENST00000636549 NUP88Q99567 741 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-227ENST00000636549 BIN1O00499 593 aa20.72■□□□□ 0.91
CACNA1A-227ENST00000636549 PRKG1Q13976 671 aa20.72■□□□□ 0.91
CACNA1A-227ENST00000636549 CHRNA2Q15822 529 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 CETN2P41208 172 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 KRT85P78386 507 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 ARHGAP29Q52LW3 1261 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 TMCO4Q5TGY1 634 aa20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
CACNA1A-227ENST00000636549 MYO1BO43795 1136 aa20.7■□□□□ 0.91
CACNA1A-227ENST00000636549 ATP2C2O75185 946 aa20.7■□□□□ 0.91
CACNA1A-227ENST00000636549 LUZP1Q86V48 1076 aa20.7■□□□□ 0.91
CACNA1A-227ENST00000636549 BRPF3Q9ULD4 1205 aa20.7■□□□□ 0.91
CACNA1A-227ENST00000636549 CBFA2T2O43439 604 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 CCT4P50991 539 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 HSP90AA4PQ58FG1 418 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 F6X3S4 739 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 NOP2P46087 812 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 IDEP14735 1019 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 RNF187Q5TA31 235 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 CCDC148Q8NFR7 591 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 PKD2L1Q9P0L9 805 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 GNAT3A8MTJ3 354 aa20.7■□□□□ 0.9
CACNA1A-227ENST00000636549 SLC5A1P13866 664 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 FOXO3O43524 673 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 CASQ1P31415 396 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 FKBP15Q5T1M5 1219 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
CACNA1A-227ENST00000636549 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 IFIT3O14879 490 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 TRMT1Q9NXH9 659 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 CEBPAP49715 358 aaPredicted RBP20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 ATF7IPQ6VMQ6 1270 aa20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 SSRP1Q08945 709 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 UQCRHP07919 91 aa20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 GIMAP7Q8NHV1 300 aa20.68■□□□□ 0.9
CACNA1A-227ENST00000636549 NUP62CLQ9H1M0 184 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 PRDM10Q9NQV6 1147 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 CEP131Q9UPN4 1083 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 CTCFLQ8NI51 663 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-227ENST00000636549 ST5P78524 1137 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 TMEM266Q2M3C6 531 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 PHACTR2O75167 634 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 CCDC40Q4G0X9 1142 aa20.66■□□□□ 0.9
CACNA1A-227ENST00000636549 TSHZ3Q63HK5 1081 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 EHMT1Q9H9B1 1298 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 CALM1P0DP23 149 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 CALM2P0DP24 149 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 CALM3P0DP25 149 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 GOLGA8AA7E2F4 631 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 GOLGA8BA8MQT2 603 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 EXOC5O00471 708 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 HLTFQ14527 1009 aaKnown RBP eCLIP20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 TMCO3Q6UWJ1 677 aa20.65■□□□□ 0.9
CACNA1A-227ENST00000636549 MTIF2P46199 727 aaKnown RBP20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 ZNF213O14771 459 aa20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 FERP16591 822 aa20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 PPP1R14CQ8TAE6 165 aa20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 WASF1Q92558 559 aa20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 UIMC1Q96RL1 719 aa20.64■□□□□ 0.9
CACNA1A-227ENST00000636549 UQCRHLA0A096LP55 91 aa20.64■□□□□ 0.89
CACNA1A-227ENST00000636549 CCDC194A0A1B0GVG4 234 aa20.64■□□□□ 0.89
CACNA1A-227ENST00000636549 TXLNBQ8N3L3 684 aa20.64■□□□□ 0.89
CACNA1A-227ENST00000636549 FAM107BQ9H098 131 aa20.64■□□□□ 0.89
CACNA1A-227ENST00000636549 POLR3GO15318 223 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-227ENST00000636549 TSNARE1Q96NA8 513 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 SYCE3A1L190 88 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 MRVI1Q9Y6F6 885 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 PSMC4P43686 418 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 SKAP1Q86WV1 359 aa20.63■□□□□ 0.89
CACNA1A-227ENST00000636549 RNF216Q9NWF9 866 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 IQCEQ6IPM2 695 aa20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 GOLIM4O00461 696 aa20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 KAT14Q9H8E8 782 aa20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 CHD1LQ86WJ1 897 aa20.62■□□□□ 0.89
CACNA1A-227ENST00000636549 ERLIN1O75477 346 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 PNISRQ8TF01 805 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 ZSWIM4Q9H7M6 989 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms