RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CRKLP46109 303 aaKnown RBP24.45■■□□□ 1.51
PNKP-224ENST00000631020 NLGN1Q8N2Q7 840 aa24.45■■□□□ 1.51
PNKP-224ENST00000631020 SALL2Q9Y467 1007 aaPredicted RBP24.45■■□□□ 1.51
PNKP-224ENST00000631020 ARHGEF1Q92888 912 aaKnown RBP24.45■■□□□ 1.5
PNKP-224ENST00000631020 VSIG10Q8N0Z9 540 aa24.44■■□□□ 1.5
PNKP-224ENST00000631020 RFC4P35249 363 aa24.42■■□□□ 1.5
PNKP-224ENST00000631020 LMOD3Q0VAK6 560 aa24.42■■□□□ 1.5
PNKP-224ENST00000631020 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
PNKP-224ENST00000631020 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
PNKP-224ENST00000631020 KIF13BQ9NQT8 1826 aa24.41■■□□□ 1.5
PNKP-224ENST00000631020 TEFQ10587 303 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 SLC39A6Q13433 755 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 WWC1Q8IX03 1113 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 GRIN3BO60391 1043 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 MMP10P09238 476 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 GYS1P13807 737 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 INTS5Q6P9B9 1019 aaKnown RBP24.4■■□□□ 1.5
PNKP-224ENST00000631020 DNAJC10Q8IXB1 793 aa24.4■■□□□ 1.5
PNKP-224ENST00000631020 CCDC87Q9NVE4 849 aa24.39■■□□□ 1.49
PNKP-224ENST00000631020 CYP19A1P11511 503 aaPredicted RBP24.38■■□□□ 1.49
PNKP-224ENST00000631020 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
PNKP-224ENST00000631020 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
PNKP-224ENST00000631020 USP42Q9H9J4 1324 aaKnown RBP24.37■■□□□ 1.49
PNKP-224ENST00000631020 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
PNKP-224ENST00000631020 YBX3P16989 372 aaKnown RBP eCLIP24.35■■□□□ 1.49
PNKP-224ENST00000631020 ZNF790Q6PG37 636 aa24.35■■□□□ 1.49
PNKP-224ENST00000631020 SOS1Q07889 1333 aaPredicted RBP24.35■■□□□ 1.49
PNKP-224ENST00000631020 HNRNPUQ00839 825 aaKnown RBP eCLIP24.35■■□□□ 1.49
PNKP-224ENST00000631020 TAF7Q15545 349 aaPredicted RBP24.35■■□□□ 1.49
PNKP-224ENST00000631020 MIS18AQ9NYP9 233 aa24.35■■□□□ 1.49
PNKP-224ENST00000631020 ZNF521Q96K83 1311 aa24.34■■□□□ 1.49
PNKP-224ENST00000631020 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
PNKP-224ENST00000631020 TEX13AQ9BXU3 409 aaPredicted RBP24.33■■□□□ 1.49
PNKP-224ENST00000631020 KIAA1551Q9HCM1 1747 aa24.32■■□□□ 1.48
PNKP-224ENST00000631020 STARD3NLO95772 234 aa24.32■■□□□ 1.48
PNKP-224ENST00000631020 HEG1Q9ULI3 1381 aa24.32■■□□□ 1.48
PNKP-224ENST00000631020 BTBD11A6QL63 1104 aa24.31■■□□□ 1.48
PNKP-224ENST00000631020 KCNQ3O43525 872 aa24.31■■□□□ 1.48
PNKP-224ENST00000631020 PARP3Q9Y6F1 533 aa24.31■■□□□ 1.48
PNKP-224ENST00000631020 TGFB2P61812 414 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 WDR63Q8IWG1 891 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 ZNF496Q96IT1 587 aaPredicted RBP24.3■■□□□ 1.48
PNKP-224ENST00000631020 COL15A1P39059 1388 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 CHL1O00533 1208 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 ZNF853P0CG23 659 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 ZNF784Q8NCA9 323 aaPredicted RBP24.3■■□□□ 1.48
PNKP-224ENST00000631020 FMNL2Q96PY5 1086 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 SRP68Q9UHB9 627 aaKnown RBP24.3■■□□□ 1.48
PNKP-224ENST00000631020 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
PNKP-224ENST00000631020 PXDNLA1KZ92 1463 aa24.29■■□□□ 1.48
PNKP-224ENST00000631020 ZPR1O75312 459 aa24.29■■□□□ 1.48
PNKP-224ENST00000631020 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
PNKP-224ENST00000631020 CALD1Q05682 793 aaKnown RBP24.28■■□□□ 1.48
PNKP-224ENST00000631020 FKBP8Q14318 412 aa24.28■■□□□ 1.48
PNKP-224ENST00000631020 CFAP44Q96MT7 982 aa24.28■■□□□ 1.48
PNKP-224ENST00000631020 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
PNKP-224ENST00000631020 NARFQ9UHQ1 456 aa24.28■■□□□ 1.48
PNKP-224ENST00000631020 IFT57Q9NWB7 429 aa24.26■■□□□ 1.47
PNKP-224ENST00000631020 BABAM1Q9NWV8 329 aa24.26■■□□□ 1.47
PNKP-224ENST00000631020 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
PNKP-224ENST00000631020 IL16Q14005 1332 aa24.26■■□□□ 1.47
PNKP-224ENST00000631020 TM4SF1P30408 202 aa24.25■■□□□ 1.47
PNKP-224ENST00000631020 TSPYL4Q9UJ04 414 aa24.25■■□□□ 1.47
PNKP-224ENST00000631020 BRCA1P38398 1863 aaKnown RBP24.25■■□□□ 1.47
PNKP-224ENST00000631020 EIF5P55010 431 aaKnown RBP24.25■■□□□ 1.47
PNKP-224ENST00000631020 GNAI1P63096 354 aa24.25■■□□□ 1.47
PNKP-224ENST00000631020 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
PNKP-224ENST00000631020 MBIPQ9NS73 344 aa24.25■■□□□ 1.47
PNKP-224ENST00000631020 A0A087WZG4 1122 aa24.24■■□□□ 1.47
PNKP-224ENST00000631020 DDR1Q08345 913 aa24.23■■□□□ 1.47
PNKP-224ENST00000631020 CDCA7LQ96GN5 454 aa24.23■■□□□ 1.47
PNKP-224ENST00000631020 NRXN2Q9P2S2 1712 aa24.22■■□□□ 1.47
PNKP-224ENST00000631020 POLRMTO00411 1230 aaKnown RBP24.22■■□□□ 1.47
PNKP-224ENST00000631020 CANXP27824 592 aaKnown RBP24.22■■□□□ 1.47
PNKP-224ENST00000631020 GOLGA2Q08379 1002 aa24.22■■□□□ 1.47
PNKP-224ENST00000631020 KDM3BQ7LBC6 1761 aa24.22■■□□□ 1.47
PNKP-224ENST00000631020 IL6STP40189 918 aaPredicted RBP24.21■■□□□ 1.47
PNKP-224ENST00000631020 EIF4A1P60842 406 aaKnown RBP24.21■■□□□ 1.47
PNKP-224ENST00000631020 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
PNKP-224ENST00000631020 ZBED9Q6R2W3 1325 aa24.21■■□□□ 1.47
PNKP-224ENST00000631020 YTHDC1Q96MU7 727 aaKnown RBP24.2■■□□□ 1.47
PNKP-224ENST00000631020 SCN7AQ01118 1682 aa24.2■■□□□ 1.46
PNKP-224ENST00000631020 AFDNP55196 1824 aaKnown RBP24.2■■□□□ 1.46
PNKP-224ENST00000631020 BCL2L12Q9HB09 334 aa24.2■■□□□ 1.46
PNKP-224ENST00000631020 A0A0G2JLW4 131 aa24.18■■□□□ 1.46
PNKP-224ENST00000631020 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
PNKP-224ENST00000631020 NFIXQ14938 502 aa24.18■■□□□ 1.46
PNKP-224ENST00000631020 KRT24Q2M2I5 525 aa24.18■■□□□ 1.46
PNKP-224ENST00000631020 ARFGEF1Q9Y6D6 1849 aa24.18■■□□□ 1.46
PNKP-224ENST00000631020 SNRPA1P09661 255 aaKnown RBP24.17■■□□□ 1.46
PNKP-224ENST00000631020 DPEP1P16444 411 aa24.17■■□□□ 1.46
PNKP-224ENST00000631020 FANCIQ9NVI1 1328 aa24.17■■□□□ 1.46
PNKP-224ENST00000631020 PRAMEF22A3QJZ6 481 aa24.16■■□□□ 1.46
PNKP-224ENST00000631020 TRMT2AQ8IZ69 625 aaKnown RBP24.16■■□□□ 1.46
PNKP-224ENST00000631020 E9PSI1 815 aa24.15■■□□□ 1.46
PNKP-224ENST00000631020 KCNA3P22001 575 aa24.15■■□□□ 1.46
PNKP-224ENST00000631020 ADCY9O60503 1353 aa24.15■■□□□ 1.46
PNKP-224ENST00000631020 A1BGP04217 495 aa24.15■■□□□ 1.46
PNKP-224ENST00000631020 NPM2Q86SE8 214 aaKnown RBP24.15■■□□□ 1.46
PNKP-224ENST00000631020 MYH16Q9H6N6 1097 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms