RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GPCPD1Q9NPB8 672 aa6.66□□□□□ -1.34
LINC00550-201ENST00000629293 TERF2IPQ9NYB0 399 aa6.66□□□□□ -1.34
LINC00550-201ENST00000629293 ZNF526Q8TF50 670 aaPredicted RBP6.66□□□□□ -1.34
LINC00550-201ENST00000629293 QRICH2Q9H0J4 1663 aa6.66□□□□□ -1.34
LINC00550-201ENST00000629293 RRS1Q15050 365 aaKnown RBP6.66□□□□□ -1.34
LINC00550-201ENST00000629293 PTCD2Q8WV60 388 aaKnown RBP6.66□□□□□ -1.34
LINC00550-201ENST00000629293 LRRC37A3O60309 1634 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 PPM1GO15355 546 aaPredicted RBP6.65□□□□□ -1.34
LINC00550-201ENST00000629293 NLGN2Q8NFZ4 835 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 COG3Q96JB2 828 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 TNS2Q63HR2 1409 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 PIK3C2AO00443 1686 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 RREB1Q92766 1687 aa6.65□□□□□ -1.34
LINC00550-201ENST00000629293 IRF5Q13568 498 aa6.65□□□□□ -1.35
LINC00550-201ENST00000629293 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.35
LINC00550-201ENST00000629293 ASTLQ6HA08 431 aaPredicted RBP6.65□□□□□ -1.35
LINC00550-201ENST00000629293 RGS22Q8NE09 1264 aa6.65□□□□□ -1.35
LINC00550-201ENST00000629293 POLR3GLQ9BT43 218 aa6.65□□□□□ -1.35
LINC00550-201ENST00000629293 CCNL1Q9UK58 526 aaPredicted RBP6.65□□□□□ -1.35
LINC00550-201ENST00000629293 PARP4Q9UKK3 1724 aaKnown RBP6.65□□□□□ -1.35
LINC00550-201ENST00000629293 SLIT3O75094 1523 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 SSTR3P32745 418 aaPredicted RBP6.64□□□□□ -1.35
LINC00550-201ENST00000629293 C1QTNF8P60827 252 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 RGPD5Q99666 1765 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 TONSLQ96HA7 1378 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 GIGYF1O75420 1035 aaPredicted RBP6.64□□□□□ -1.35
LINC00550-201ENST00000629293 MDM2Q00987 491 aaPredicted RBP6.64□□□□□ -1.35
LINC00550-201ENST00000629293 TSR1Q2NL82 804 aaKnown RBP6.64□□□□□ -1.35
LINC00550-201ENST00000629293 MPRIPQ6WCQ1 1025 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 SNRKQ9NRH2 765 aa6.64□□□□□ -1.35
LINC00550-201ENST00000629293 ST20-MTHFSA0A0A6YYL1 179 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 ATMINO43313 823 aaPredicted RBP6.63□□□□□ -1.35
LINC00550-201ENST00000629293 SMIM5Q71RC9 77 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
LINC00550-201ENST00000629293 RAPGEF4Q8WZA2 1011 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 OCEL1Q9H607 264 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 A0A1W2PP64 1363 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 SBNO2Q9Y2G9 1366 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 MYOM1P52179 1685 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 MAP3K19Q56UN5 1328 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 PHF14O94880 888 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 CLCN1P35523 988 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 IP6K1Q92551 441 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 PNPLA7Q6ZV29 1317 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 FAM161AQ3B820 660 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 METTL3Q86U44 580 aaKnown RBP6.63□□□□□ -1.35
LINC00550-201ENST00000629293 TTC13Q8NBP0 860 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 BEGAINQ9BUH8 593 aa6.63□□□□□ -1.35
LINC00550-201ENST00000629293 SBF2Q86WG5 1849 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 SPDYE5A6NIY4 337 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 TBC1D12O60347 775 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 PEAK1Q9H792 1746 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 KIAA1210Q9ULL0 1709 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 HOXC9P31274 260 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 USP47Q96K76 1375 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
LINC00550-201ENST00000629293 AKAP12Q02952 1782 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 SLC34A2O95436 690 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 IER5LQ5T953 404 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 NBPF6Q5VWK0 638 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 RETREG2Q8NC44 543 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 NBPF4Q96M43 638 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 PCDHGA10Q9Y5H3 936 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 NFAT5O94916 1531 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 COL18A1P39060 1754 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 COL23A1Q86Y22 540 aaPredicted RBP6.61□□□□□ -1.35
LINC00550-201ENST00000629293 SLC16A10Q8TF71 515 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 SERPINA10Q9UK55 444 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 TRPM1Q7Z4N2 1603 aa6.61□□□□□ -1.35
LINC00550-201ENST00000629293 POTEFA5A3E0 1075 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 YBX3P16989 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00550-201ENST00000629293 TATP17735 454 aaPredicted RBP6.6□□□□□ -1.35
LINC00550-201ENST00000629293 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
LINC00550-201ENST00000629293 HSP90AB2PQ58FF8 381 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 MTMR14Q8NCE2 650 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 BCL9O00512 1426 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 EDC4Q6P2E9 1401 aaKnown RBP6.6□□□□□ -1.35
LINC00550-201ENST00000629293 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 EVX2Q03828 476 aa6.6□□□□□ -1.35
LINC00550-201ENST00000629293 PCNTO95613 3336 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 RFC5P40937 340 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 PXYLP1Q8TE99 480 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 GPR37L1O60883 481 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 BANK1Q8NDB2 785 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
LINC00550-201ENST00000629293 POLR3EQ9NVU0 708 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 LIMD1Q9UGP4 676 aa6.59□□□□□ -1.35
LINC00550-201ENST00000629293 ANKRD36BQ8N2N9 1353 aa6.59□□□□□ -1.36
LINC00550-201ENST00000629293 CASZ1Q86V15 1759 aa6.59□□□□□ -1.36
LINC00550-201ENST00000629293 ADGRG1Q9Y653 693 aa6.59□□□□□ -1.36
LINC00550-201ENST00000629293 CD163L1Q9NR16 1453 aa6.58□□□□□ -1.36
LINC00550-201ENST00000629293 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
LINC00550-201ENST00000629293 BTAF1O14981 1849 aa6.58□□□□□ -1.36
LINC00550-201ENST00000629293 FYB1O15117 783 aa6.58□□□□□ -1.36
LINC00550-201ENST00000629293 MEGF6O75095 1541 aa6.58□□□□□ -1.36
LINC00550-201ENST00000629293 TMF1P82094 1093 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms