RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SLC16A10Q8TF71 515 aa11.63□□□□□ -0.55
CHD2-216ENST00000629104 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
CHD2-216ENST00000629104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
CHD2-216ENST00000629104 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
CHD2-216ENST00000629104 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
CHD2-216ENST00000629104 SMIM5Q71RC9 77 aa11.62□□□□□ -0.55
CHD2-216ENST00000629104 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
CHD2-216ENST00000629104 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
CHD2-216ENST00000629104 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
CHD2-216ENST00000629104 BABAM1Q9NWV8 329 aa11.62□□□□□ -0.55
CHD2-216ENST00000629104 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
CHD2-216ENST00000629104 STARD3NLO95772 234 aa11.61□□□□□ -0.55
CHD2-216ENST00000629104 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
CHD2-216ENST00000629104 SRCAPQ6ZRS2 3230 aa11.61□□□□□ -0.55
CHD2-216ENST00000629104 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
CHD2-216ENST00000629104 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
CHD2-216ENST00000629104 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
CHD2-216ENST00000629104 EIF4A1P60842 406 aaKnown RBP11.6□□□□□ -0.55
CHD2-216ENST00000629104 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
CHD2-216ENST00000629104 TRAPPC3LQ5T215 181 aa11.6□□□□□ -0.55
CHD2-216ENST00000629104 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
CHD2-216ENST00000629104 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
CHD2-216ENST00000629104 CHL1O00533 1208 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 PTGER2P43116 358 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
CHD2-216ENST00000629104 MIER1Q8N108 512 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
CHD2-216ENST00000629104 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
CHD2-216ENST00000629104 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
CHD2-216ENST00000629104 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
CHD2-216ENST00000629104 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
CHD2-216ENST00000629104 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
CHD2-216ENST00000629104 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
CHD2-216ENST00000629104 COL15A1P39059 1388 aa11.57□□□□□ -0.56
CHD2-216ENST00000629104 A1BGP04217 495 aa11.57□□□□□ -0.56
CHD2-216ENST00000629104 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
CHD2-216ENST00000629104 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
CHD2-216ENST00000629104 RFC4P35249 363 aa11.57□□□□□ -0.56
CHD2-216ENST00000629104 MSL1Q68DK7 614 aa11.57□□□□□ -0.56
CHD2-216ENST00000629104 SCN7AQ01118 1682 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
CHD2-216ENST00000629104 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
CHD2-216ENST00000629104 GNAI1P63096 354 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 MBIPQ9NS73 344 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
CHD2-216ENST00000629104 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
CHD2-216ENST00000629104 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
CHD2-216ENST00000629104 GYS1P13807 737 aa11.55□□□□□ -0.56
CHD2-216ENST00000629104 POLD1P28340 1107 aa11.55□□□□□ -0.56
CHD2-216ENST00000629104 PPP1R1BQ9UD71 204 aaPredicted RBP11.55□□□□□ -0.56
CHD2-216ENST00000629104 SRP68Q9UHB9 627 aaKnown RBP11.55□□□□□ -0.56
CHD2-216ENST00000629104 IL16Q14005 1332 aa11.55□□□□□ -0.56
CHD2-216ENST00000629104 A0A087WZG4 1122 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
CHD2-216ENST00000629104 KRT24Q2M2I5 525 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
CHD2-216ENST00000629104 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 ARXQ96QS3 562 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 NARFQ9UHQ1 456 aa11.54□□□□□ -0.56
CHD2-216ENST00000629104 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
CHD2-216ENST00000629104 ZPR1O75312 459 aa11.53□□□□□ -0.56
CHD2-216ENST00000629104 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
CHD2-216ENST00000629104 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
CHD2-216ENST00000629104 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
CHD2-216ENST00000629104 HOXB7P09629 217 aa11.52□□□□□ -0.57
CHD2-216ENST00000629104 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
CHD2-216ENST00000629104 FKBP8Q14318 412 aa11.52□□□□□ -0.57
CHD2-216ENST00000629104 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
CHD2-216ENST00000629104 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
CHD2-216ENST00000629104 MMP10P09238 476 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
CHD2-216ENST00000629104 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
CHD2-216ENST00000629104 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 ZNF521Q96K83 1311 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
CHD2-216ENST00000629104 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
CHD2-216ENST00000629104 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
CHD2-216ENST00000629104 MYL6BP14649 208 aa11.5□□□□□ -0.57
CHD2-216ENST00000629104 PDIA6Q15084 440 aa11.5□□□□□ -0.57
CHD2-216ENST00000629104 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
CHD2-216ENST00000629104 NUP98P52948 1817 aa11.5□□□□□ -0.57
CHD2-216ENST00000629104 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
CHD2-216ENST00000629104 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 TM4SF1P30408 202 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
CHD2-216ENST00000629104 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
CHD2-216ENST00000629104 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
CHD2-216ENST00000629104 DDR1Q08345 913 aa11.48□□□□□ -0.57
CHD2-216ENST00000629104 NFIXQ14938 502 aa11.48□□□□□ -0.57
CHD2-216ENST00000629104 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms