RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 C10orf71Q711Q0 1435 aa22.85■■□□□ 1.25
SPTAN1-214ENST00000628614 FKBP8Q14318 412 aa22.84■■□□□ 1.25
SPTAN1-214ENST00000628614 TGFB2P61812 414 aa22.83■■□□□ 1.25
SPTAN1-214ENST00000628614 MCM10Q7L590 875 aa22.83■■□□□ 1.25
SPTAN1-214ENST00000628614 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
SPTAN1-214ENST00000628614 KIF13BQ9NQT8 1826 aa22.82■■□□□ 1.24
SPTAN1-214ENST00000628614 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
SPTAN1-214ENST00000628614 NARFQ9UHQ1 456 aa22.82■■□□□ 1.24
SPTAN1-214ENST00000628614 PXDNLA1KZ92 1463 aa22.81■■□□□ 1.24
SPTAN1-214ENST00000628614 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
SPTAN1-214ENST00000628614 USPL1Q5W0Q7 1092 aa22.81■■□□□ 1.24
SPTAN1-214ENST00000628614 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
SPTAN1-214ENST00000628614 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
SPTAN1-214ENST00000628614 MYBBP1AQ9BQG0 1328 aaKnown RBP22.79■■□□□ 1.24
SPTAN1-214ENST00000628614 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
SPTAN1-214ENST00000628614 A0A087WZG4 1122 aa22.78■■□□□ 1.24
SPTAN1-214ENST00000628614 KCNQ3O43525 872 aa22.78■■□□□ 1.24
SPTAN1-214ENST00000628614 EIF5P55010 431 aaKnown RBP22.78■■□□□ 1.24
SPTAN1-214ENST00000628614 DDR1Q08345 913 aa22.78■■□□□ 1.24
SPTAN1-214ENST00000628614 TM4SF1P30408 202 aa22.77■■□□□ 1.24
SPTAN1-214ENST00000628614 NFE2L2Q16236 605 aa22.77■■□□□ 1.24
SPTAN1-214ENST00000628614 WWC3Q9ULE0 1092 aa22.77■■□□□ 1.24
SPTAN1-214ENST00000628614 KIAA1551Q9HCM1 1747 aa22.77■■□□□ 1.23
SPTAN1-214ENST00000628614 POLRMTO00411 1230 aaKnown RBP22.76■■□□□ 1.23
SPTAN1-214ENST00000628614 TAF7Q15545 349 aaPredicted RBP22.76■■□□□ 1.23
SPTAN1-214ENST00000628614 IL6STP40189 918 aaPredicted RBP22.75■■□□□ 1.23
SPTAN1-214ENST00000628614 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
SPTAN1-214ENST00000628614 A0A0G2JLW4 131 aa22.74■■□□□ 1.23
SPTAN1-214ENST00000628614 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
SPTAN1-214ENST00000628614 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 A1BGP04217 495 aa22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 DPEP1P16444 411 aa22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 ZEB1P37275 1124 aaPredicted RBP22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 NFIXQ14938 502 aa22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 BCL2L12Q9HB09 334 aa22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 ZNF330Q9Y3S2 320 aaPredicted RBP22.73■■□□□ 1.23
SPTAN1-214ENST00000628614 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
SPTAN1-214ENST00000628614 DLG5Q8TDM6 1919 aa22.71■■□□□ 1.23
SPTAN1-214ENST00000628614 BCS1LQ9Y276 419 aa22.71■■□□□ 1.23
SPTAN1-214ENST00000628614 USP16Q9Y5T5 823 aa22.71■■□□□ 1.23
SPTAN1-214ENST00000628614 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
SPTAN1-214ENST00000628614 NRXN2Q9P2S2 1712 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 PRAMEF22A3QJZ6 481 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 SERPINB2P05120 415 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 KCNA3P22001 575 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
SPTAN1-214ENST00000628614 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
SPTAN1-214ENST00000628614 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 BICDL1Q6ZP65 573 aa22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 DZIP3Q86Y13 1208 aaKnown RBP22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 BRCA1P38398 1863 aaKnown RBP22.66■■□□□ 1.22
SPTAN1-214ENST00000628614 CAMTA2O94983 1202 aa22.65■■□□□ 1.22
SPTAN1-214ENST00000628614 RIPK4P57078 832 aa22.65■■□□□ 1.22
SPTAN1-214ENST00000628614 LMOD3Q0VAK6 560 aa22.65■■□□□ 1.22
SPTAN1-214ENST00000628614 TBC1D9BQ66K14 1250 aa22.65■■□□□ 1.22
SPTAN1-214ENST00000628614 AFDNP55196 1824 aaKnown RBP22.65■■□□□ 1.22
SPTAN1-214ENST00000628614 ADCY9O60503 1353 aa22.64■■□□□ 1.22
SPTAN1-214ENST00000628614 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
SPTAN1-214ENST00000628614 CHRNA5P30532 468 aa22.64■■□□□ 1.21
SPTAN1-214ENST00000628614 PIP4K2AP48426 406 aaPredicted RBP22.64■■□□□ 1.21
SPTAN1-214ENST00000628614 DALRD3Q5D0E6 543 aaKnown RBP22.64■■□□□ 1.21
SPTAN1-214ENST00000628614 ATP10DQ9P241 1426 aa22.64■■□□□ 1.21
SPTAN1-214ENST00000628614 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
SPTAN1-214ENST00000628614 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
SPTAN1-214ENST00000628614 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
SPTAN1-214ENST00000628614 BCORQ6W2J9 1755 aa22.63■■□□□ 1.21
SPTAN1-214ENST00000628614 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
SPTAN1-214ENST00000628614 ARHGAP27Q6ZUM4 889 aa22.61■■□□□ 1.21
SPTAN1-214ENST00000628614 SETDB2Q96T68 719 aa22.61■■□□□ 1.21
SPTAN1-214ENST00000628614 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
SPTAN1-214ENST00000628614 ARFGEF1Q9Y6D6 1849 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 NBPF26B4DH59 902 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 NBPF10Q6P3W6 841 aaKnown RBP22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 CLEC4GQ6UXB4 293 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 NBPF15Q8N660 670 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 RUNDC1Q96C34 613 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 TSPYL4Q9UJ04 414 aa22.6■■□□□ 1.21
SPTAN1-214ENST00000628614 RGL2O15211 777 aa22.59■■□□□ 1.21
SPTAN1-214ENST00000628614 BABAM1Q9NWV8 329 aa22.59■■□□□ 1.21
SPTAN1-214ENST00000628614 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
SPTAN1-214ENST00000628614 H0YIN7 160 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 NPHP1O15259 732 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 PRR5LQ6MZQ0 368 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 C2CD5Q86YS7 1000 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 CNBD1Q8NA66 436 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 BRIP1Q9BX63 1249 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 RRP7AQ9Y3A4 280 aaKnown RBP22.57■■□□□ 1.2
SPTAN1-214ENST00000628614 PDE6BP35913 854 aa22.56■■□□□ 1.2
SPTAN1-214ENST00000628614 GPBP1L1Q9HC44 474 aaPredicted RBP22.56■■□□□ 1.2
SPTAN1-214ENST00000628614 DLEC1Q9Y238 1755 aa22.55■■□□□ 1.2
SPTAN1-214ENST00000628614 ST5P78524 1137 aa22.55■■□□□ 1.2
SPTAN1-214ENST00000628614 NEUROD2Q15784 382 aa22.55■■□□□ 1.2
SPTAN1-214ENST00000628614 TTLL6Q8N841 843 aa22.55■■□□□ 1.2
SPTAN1-214ENST00000628614 C1QTNF8P60827 252 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms