RNA–Protein interactions for RNA: ENST00000626839.2

KCNQ2-213, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KCNQ2, Length 9,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-213ENST00000626839 IQCA1Q86XH1 822 aa20.28■□□□□ 0.84
KCNQ2-213ENST00000626839 RNF41Q9H4P4 317 aaPredicted RBP20.28■□□□□ 0.84
KCNQ2-213ENST00000626839 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
KCNQ2-213ENST00000626839 CAMK4Q16566 473 aa20.28■□□□□ 0.84
KCNQ2-213ENST00000626839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 CTNNBL1Q8WYA6 563 aaPredicted RBP20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 ITSN2Q9NZM3 1697 aa20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 KIF4BQ2VIQ3 1234 aa20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 MX1P20591 662 aa20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 KLHL10Q6JEL2 608 aa20.27■□□□□ 0.84
KCNQ2-213ENST00000626839 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
KCNQ2-213ENST00000626839 FSD2A1L4K1 749 aa20.27■□□□□ 0.83
KCNQ2-213ENST00000626839 METTL24Q5JXM2 366 aa20.27■□□□□ 0.83
KCNQ2-213ENST00000626839 IL27Q8NEV9 243 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 MKNK2Q9HBH9 465 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 AMPD3Q01432 767 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 STXBP4Q6ZWJ1 553 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 C6orf163Q5TEZ5 329 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 FERP16591 822 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 SLC12A7Q9Y666 1083 aa20.26■□□□□ 0.83
KCNQ2-213ENST00000626839 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 MACROD2A1Z1Q3 448 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 STX1AQ16623 288 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 PLVAPQ9BX97 442 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 PRDM11Q9NQV5 511 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 POLR3GO15318 223 aaPredicted RBP20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 UBE4AQ14139 1066 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 ANKIB1Q9P2G1 1089 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 ABCF2Q9UG63 623 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 IKBKGQ9Y6K9 419 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 MAP3K12Q12852 859 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 CTR9Q6PD62 1173 aa20.25■□□□□ 0.83
KCNQ2-213ENST00000626839 SPECC1Q5M775 1068 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 DZIP1Q86YF9 867 aaKnown RBP20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 ZPR1O75312 459 aa20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 POLR3DP05423 398 aaPredicted RBP20.24■□□□□ 0.83
KCNQ2-213ENST00000626839 IFI16Q16666 785 aaKnown RBP20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 CCDC172P0C7W6 258 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 TSNARE1Q96NA8 513 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 KIF5BP33176 963 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 UBA5Q9GZZ9 404 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 FERMT2Q96AC1 680 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 KANK3Q6NY19 840 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 MPNDQ8N594 471 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 COMMD10Q9Y6G5 202 aa20.23■□□□□ 0.83
KCNQ2-213ENST00000626839 PABPN1LA6NDY0 278 aaKnown RBP20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 DRC1Q96MC2 740 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 MCM5P33992 734 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 DHX37Q8IY37 1157 aaKnown RBP20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 CABP1Q9NZU7 370 aa20.22■□□□□ 0.83
KCNQ2-213ENST00000626839 HLTFQ14527 1009 aaKnown RBP eCLIP20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 CFAP57Q96MR6 1250 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 CALML4Q96GE6 196 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 PRKCSHP14314 528 aaPredicted RBP20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 CEP112Q8N8E3 955 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 CNNM3Q8NE01 707 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 BAG4O95429 457 aaKnown RBP20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 ALDH1L2Q3SY69 923 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
KCNQ2-213ENST00000626839 TDRD12Q587J7 1177 aaKnown RBP20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 TCP11L1Q9NUJ3 509 aa20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 BCCIPQ9P287 314 aaKnown RBP eCLIP20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 LRRC45Q96CN5 670 aa20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 DDX19AQ9NUU7 478 aaKnown RBP20.2■□□□□ 0.82
KCNQ2-213ENST00000626839 ACTN2P35609 894 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 HOMER2Q9NSB8 354 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 GOLIM4O00461 696 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 SLC5A1P13866 664 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 GOLGA8BA8MQT2 603 aa20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 MPHOSPH6Q99547 160 aaKnown RBP20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 DDX23Q9BUQ8 820 aaKnown RBP20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 URI1O94763 535 aaPredicted RBP20.19■□□□□ 0.82
KCNQ2-213ENST00000626839 RNF187Q5TA31 235 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 LRRC27Q9C0I9 530 aa20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 PPM1FP49593 454 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 TTF1Q15361 905 aaPredicted RBP20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
KCNQ2-213ENST00000626839 CCDC96Q2M329 555 aa20.17■□□□□ 0.82
KCNQ2-213ENST00000626839 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
KCNQ2-213ENST00000626839 TTC12Q9H892 705 aaPredicted RBP20.17■□□□□ 0.82
KCNQ2-213ENST00000626839 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms