RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NOP58Q9Y2X3 529 aaKnown RBP14.67□□□□□ -0.06
LINC00538-201ENST00000626109 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
LINC00538-201ENST00000626109 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
LINC00538-201ENST00000626109 EXOC6Q8TAG9 804 aa14.66□□□□□ -0.06
LINC00538-201ENST00000626109 GJD4Q96KN9 370 aaPredicted RBP14.66□□□□□ -0.06
LINC00538-201ENST00000626109 CDCA7Q9BWT1 371 aaPredicted RBP14.66□□□□□ -0.06
LINC00538-201ENST00000626109 MEGF6O75095 1541 aa14.66□□□□□ -0.06
LINC00538-201ENST00000626109 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
LINC00538-201ENST00000626109 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
LINC00538-201ENST00000626109 PARP4Q9UKK3 1724 aaKnown RBP14.66□□□□□ -0.06
LINC00538-201ENST00000626109 PLEKHF1Q96S99 279 aa14.65□□□□□ -0.06
LINC00538-201ENST00000626109 OVOS2A0A0G2JMS6 1433 aa14.65□□□□□ -0.06
LINC00538-201ENST00000626109 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
LINC00538-201ENST00000626109 WNK3Q9BYP7 1800 aa14.65□□□□□ -0.06
LINC00538-201ENST00000626109 GLIPR1L2Q4G1C9 344 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 MICAL1Q8TDZ2 1067 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 AK7Q96M32 723 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 IPO9Q96P70 1041 aaKnown RBP14.64□□□□□ -0.07
LINC00538-201ENST00000626109 GLI3P10071 1580 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 MS4A1P11836 297 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
LINC00538-201ENST00000626109 AMOTQ4VCS5 1084 aa14.64□□□□□ -0.07
LINC00538-201ENST00000626109 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
LINC00538-201ENST00000626109 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
LINC00538-201ENST00000626109 SPG7Q9UQ90 795 aa14.63□□□□□ -0.07
LINC00538-201ENST00000626109 A0A0G2JS52 829 aa14.62□□□□□ -0.07
LINC00538-201ENST00000626109 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
LINC00538-201ENST00000626109 CDCA7LQ96GN5 454 aa14.62□□□□□ -0.07
LINC00538-201ENST00000626109 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
LINC00538-201ENST00000626109 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
LINC00538-201ENST00000626109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC00538-201ENST00000626109 RBM6P78332 1123 aaKnown RBP14.62□□□□□ -0.07
LINC00538-201ENST00000626109 ZNF662Q6ZS27 426 aa14.62□□□□□ -0.07
LINC00538-201ENST00000626109 RGS17Q9UGC6 210 aaPredicted RBP14.62□□□□□ -0.07
LINC00538-201ENST00000626109 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
LINC00538-201ENST00000626109 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
LINC00538-201ENST00000626109 ZCRB1Q8TBF4 217 aaKnown RBP14.61□□□□□ -0.07
LINC00538-201ENST00000626109 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
LINC00538-201ENST00000626109 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
LINC00538-201ENST00000626109 APAF1O14727 1248 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 MTHFSDQ2M296 383 aaKnown RBP14.6□□□□□ -0.07
LINC00538-201ENST00000626109 DRC1Q96MC2 740 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 TNS2Q63HR2 1409 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 EXOC5O00471 708 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
LINC00538-201ENST00000626109 RXRBP28702 533 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 DDB1Q16531 1140 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
LINC00538-201ENST00000626109 NGEFQ8N5V2 710 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 KIAA1522Q9P206 1035 aaPredicted RBP14.6□□□□□ -0.07
LINC00538-201ENST00000626109 THSD7AQ9UPZ6 1657 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 PCDH11XQ9BZA7 1347 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 PCDH11YQ9BZA8 1340 aa14.6□□□□□ -0.07
LINC00538-201ENST00000626109 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
LINC00538-201ENST00000626109 TMPOP42166 694 aaKnown RBP14.59□□□□□ -0.07
LINC00538-201ENST00000626109 FOSBP53539 338 aa14.59□□□□□ -0.07
LINC00538-201ENST00000626109 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
LINC00538-201ENST00000626109 RNF25Q96BH1 459 aaPredicted RBP14.59□□□□□ -0.07
LINC00538-201ENST00000626109 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.07
LINC00538-201ENST00000626109 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
LINC00538-201ENST00000626109 POTEAQ6S8J7 498 aa14.58□□□□□ -0.08
LINC00538-201ENST00000626109 RRP7AQ9Y3A4 280 aaKnown RBP14.58□□□□□ -0.08
LINC00538-201ENST00000626109 RIPK4P57078 832 aa14.57□□□□□ -0.08
LINC00538-201ENST00000626109 SEPT12Q8IYM1 358 aa14.57□□□□□ -0.08
LINC00538-201ENST00000626109 IFNL2Q8IZJ0 200 aa14.57□□□□□ -0.08
LINC00538-201ENST00000626109 MAP3K5Q99683 1374 aa14.57□□□□□ -0.08
LINC00538-201ENST00000626109 LMOD3Q0VAK6 560 aa14.56□□□□□ -0.08
LINC00538-201ENST00000626109 AKAP4Q5JQC9 854 aa14.56□□□□□ -0.08
LINC00538-201ENST00000626109 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
LINC00538-201ENST00000626109 PHKG2P15735 406 aa14.56□□□□□ -0.08
LINC00538-201ENST00000626109 POLA2Q14181 598 aa14.56□□□□□ -0.08
LINC00538-201ENST00000626109 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
LINC00538-201ENST00000626109 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
LINC00538-201ENST00000626109 GNAT3A8MTJ3 354 aa14.55□□□□□ -0.08
LINC00538-201ENST00000626109 CYP27B1O15528 508 aa14.55□□□□□ -0.08
LINC00538-201ENST00000626109 RAB11FIP3O75154 756 aa14.55□□□□□ -0.08
LINC00538-201ENST00000626109 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
LINC00538-201ENST00000626109 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
LINC00538-201ENST00000626109 PDE4AP27815 886 aa14.54□□□□□ -0.08
LINC00538-201ENST00000626109 PDE4DQ08499 809 aa14.54□□□□□ -0.08
LINC00538-201ENST00000626109 HTATSF1O43719 755 aaKnown RBP14.54□□□□□ -0.08
LINC00538-201ENST00000626109 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
LINC00538-201ENST00000626109 PLIN1O60240 522 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
LINC00538-201ENST00000626109 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 PEX14O75381 377 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 BACH2Q9BYV9 841 aa14.53□□□□□ -0.08
LINC00538-201ENST00000626109 DLG5Q8TDM6 1919 aa14.52□□□□□ -0.08
LINC00538-201ENST00000626109 RGS12O14924 1447 aa14.52□□□□□ -0.09
LINC00538-201ENST00000626109 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
LINC00538-201ENST00000626109 GIMAP6Q6P9H5 292 aa14.51□□□□□ -0.09
LINC00538-201ENST00000626109 MPRIPQ6WCQ1 1025 aa14.51□□□□□ -0.09
LINC00538-201ENST00000626109 MARCH10Q8NA82 808 aaPredicted RBP14.51□□□□□ -0.09
LINC00538-201ENST00000626109 SREK1Q8WXA9 508 aaKnown RBP14.51□□□□□ -0.09
LINC00538-201ENST00000626109 MRRFQ96E11 262 aaKnown RBP14.51□□□□□ -0.09
LINC00538-201ENST00000626109 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
LINC00538-201ENST00000626109 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms